AMCG00006177


Basic Information

Item Value
gene id AMCG00006177
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 18453898 ~ 18455420 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006177
CGTGCCGTGATGCGTGCAGGAGACGCTCGCAGTAACCTAGTTTGAACCGTACATGGATACTTTTTAAATTCTCTATTAAAAACTACATTGGAATAAATAATCCcacatcttgttgttttccaatGGCCCAATGTCACGGAGAAATAGTTTGCAAAAGCGGAGCCAGTGAAGTGACTGAGTCTATGGGAAAAGATGACACAGCCCTGGTTAAAGCATATGAGAAGGCTGTGAAGACATTTGCGGAGTCAGCCAAGGCAGCGGAGGGGGAGAGAGCTGTCATGGACGGGGAGTCAGAATCTGACATACAGAGCGAGAGATCAGATGAAGGGAGGATAACGGCACAGGTACAGCAGGGATTGGCATCCATGTCTGAACAATTAGATAATCATTTGCTCACATCTCACTTTACCTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006177 True 416 mRNA 0.45 3 18453898 18455420

Neighbor

gene id symbol gene type direction distance location
AMCG00006139 NA coding upstream 74167 18372934 ~ 18379731 (+)
AMCG00006169 diras1,LOC106573976,LOC105906138,LOC106613605 coding upstream 323402 18116638 ~ 18130496 (+)
AMCG00006164 NA coding upstream 445527 18004577 ~ 18008371 (+)
AMCG00006162 LOC106613602 coding upstream 493688 17948523 ~ 17960210 (+)
AMCG00006187 NA coding upstream 548274 17879983 ~ 17905624 (+)
AMCG00006176 NA coding downstream 1294 18456714 ~ 18467995 (+)
AMCG00006173 LOC106573927,LOC106613609 coding downstream 62962 18518382 ~ 18534722 (+)
AMCG00006175 fcho1,LOC107751067,LOC101065258,LOC102200842,LOC103367496 coding downstream 137207 18592627 ~ 18636029 (+)
AMCG00006170 NA coding downstream 264253 18719673 ~ 18741090 (+)
AMCG00006168 NA coding downstream 545354 19000774 ~ 19001556 (+)
G156671 NA non-coding upstream 230750 18158840 ~ 18223148 (+)
G156598 NA non-coding upstream 609922 17842139 ~ 17843976 (+)
G156567 NA non-coding upstream 676028 17774665 ~ 17777870 (+)
G156564 LOC100846954,LOC107575789 non-coding upstream 745177 17707670 ~ 17708721 (+)
G156521 NA non-coding upstream 882366 17567559 ~ 17571532 (+)
G156769 NA non-coding downstream 287182 18742602 ~ 18749749 (+)
G156771 NA non-coding downstream 301506 18756926 ~ 18757205 (+)
G156772 NA non-coding downstream 301846 18757266 ~ 18757542 (+)
G156777 NA non-coding downstream 321772 18777192 ~ 18777554 (+)
G156807 NA non-coding downstream 385383 18840803 ~ 18843866 (+)
AMCG00006138 NA other upstream 97309 18190224 ~ 18356589 (+)
G156640 NA other upstream 473261 17973741 ~ 17980637 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 689670 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 718814 17662190 ~ 17735084 (+)
AMCG00006149 NA other upstream 1326265 17123205 ~ 17127633 (+)
AMCG00006174 NA other downstream 22708 18478128 ~ 18480087 (+)

Expression


Co-expression Network