AMCG00006191


Basic Information

Item Value
gene id AMCG00006191
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 17788983 ~ 17811459 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006191
GTCAAGTAGAAGGGGAGGTCACATTATTGCTATTAGTGAGGAGATAGACTTGGGGGTATTTGGTTAGCAGAACAGAGAactattgtgttgttgttgttttttttgggggggaaataatgCAGATCATGAGGCCACGTGTGGATAGGAAGTTTTCTTTAGACAGTCTAAAcTATCAGATGGAAAGTGGGAGCATCTCTGGGAAATTAAAGAAAGGGAAGTACAATAAGAAGACTGAGCCAAGGAAAGCACAGAGCTTGGAAGAAGCCCAACTGGAGATCCAGAGCTTTAATAAGGCCCAAGTCCTTGCCAAACAAGGAAATATAAGGTCCCAGACATTTGACTTGGCATATGAAAAAACCTTTGAGAGATCAGAAGACACCGGGTCAATTAGGAGTaatTTTATAAAGCACAATAAGACATTCCACAAGCTTTTCCGAGAGGTTCCGGATAAAGAACCTTTAACAGATGCTTTCACATGTGCGATGCAAAGGGAAGTACTTTACCACGGCAAGctgtacatttcagaaaactACATCTGTTTCTACTCCTCTGTGCTGCTCAAAGACACCAAGTATATTTTTGTGTCAATGAGGAATCGAGAAGCCTGTTTCAAGATGTTGAAGTCTTTGTGTGCTCAACTAGAGGATGCCAGTGTGAACAGCAGTCCTGTATTCTCCTCTGCAAAAAACAGCTTTGATAATGGGAGAAACTTGAACTCTAGCCAATCCAGCCTAGATGACTTTGATCAGCCAGATGAGAAAGATTCACCGCAAGACATTTCAGTCATAGCAAAATCCGCACCAGGTGACTCCAGGATTTGGTCAATACCTCAGAAGATCACATCCTTTTTCCTCCTGCGAGAGTTCAGCACTGTCAACATCCTCCTGTTCATTTATCTAATGTTGGttgtcctgctgctgctgtcctcagggTATATCGGCCTGCGTATTGTAGCATTAGAGGAACAGATAACTTCTATGGGGGCTTCTATGGAGTTTTCCCTGCAGAATGAgtACAAGGAGACACAGCCCCATGGCAGTGCAGAGGGTTTAGAAGATTAGTGTTCTGAGTGAATGGATAATGTTGTCCAGCCAGGATGATGATTAAGAAGGTTCTTCAAGACTTCAGAGGAGgaaaaccttttcatttttaataaacaatgtttttaatgctaGCAGCCTTTGGTTGCTTTGGTTTTAAAACCAAAGACTGTTATAATAACCAAAAGGTTATTTATCATCTTGCTGGAGATTGAACATACTCTTAAGTACACTAGTTGCTGTAGATTAAATCGGTACAAACAGTGCATAAAGTGGGCTACTGGAAATATAGCAATGGCTTAAAGTAAGAGTATGTTTTGAGAAGTCTGGAGAATGTCTAAGTACATTCTGAAGGTGCTTTTCAAGAGAAGTAATATTCCTTCTTCTTTTGGTCTCAGAGCCAAAGCAAGGTAATATCAACATATTGTTTACAAGGTTTccataaaatcatattttggtAAGCTATTTCTACAAAGGAGAAAAGAGACATGTGTATCTCTTAGAAATGCACCgggtataaaaaatgtaatgactcACAGGGAAAAACATAGTACCTGAATCCAATGTTGGAAGATACATATATAGTTTGTCtaaactttcatattttatatatatatatatatatataggatagAGAGttggaaaaatacaatgttattgttgttaGCATTCCATACTGGGTAAAGATGACATTAatcatcagaaaaaaaaggtttcaccaactttacaaaaaaaaagtaatcatgTACCTGTTTTAATTTGACTGAAAGTACTGAAAATTATGCTAATGATATTTTCTGTGCACTCTGTTTTAACTGTTTACCGCACTTACCTGTCTTGAAGTGTATGCAAGCCCTAACATACCAGAAACTGTGTAAGGGACATTAGTCCATTTGTGATCAATGTGAATGACTCGGCATAAAgatatgttgattttttttattttacatatataatagCAGCTTGTGGCCATTAGTACTGTCGGGGCGGCGCCTGAATCACTAACCATGCCCACCTtggaaataatttgaataatgacGTGCAAAATGATGTCACTATGTTTTAGGCTATATACGAGAATAGACCATAAATAGCCTAGTTGAGACCATCGCAGCTAGTAGCCCACAAAATGCTGCAGTTGCACATACTTTAAAAGATGCATTTCCTTTATCCTATAACCCAAGTGTCCCCGACAAAAAAGGCACAACAATGAGAAGGAtatgttagtttttaatttacaacaaATAGACCATCTTCAGTTGCTTAATCATGCAGACTGATGTAGGAGACCGGTGCAGAGGTCAGAGTTGTGGGGTAGGAGCAGCAGATGCTCGTGAACAGCGTGAACAGAAAAATGAACAGCCTTGATGCACACTAATGGATTttccacaaaacacaaagcacaaaccaaagtaaatacaaatgcacCTAAATTAGTTTGAGAGTGCCTATTTTATTGCAggcatttgtatttcattgcaGGTATCTGAGAGAATCTTACTGTGAAGTTGACTGTGTTTTTACACTACATGGATTCATATGCACCTTTCAAACACGTCAGTCAATTTGTTAAATTACTTTTCCATATGCaatcttcattttgtttatgaacattttaaagggaatatatcaaatatttttataaaatatttgtatttttggactatttaattttaatttaatattgtatatgttgGAATGTCTCCTGTAATTGTAGTTtgataaatatagatatttgCAATCTATGTGATTGCATGCCCCCTCTGTGAGATGGGCATTGGGTTTTATCCTAcaaataattaacttttaataTTGAAGAAAGATCTAAAGAAATGTGGTTAAAGCAATTGCATAGATTGTGTAACAAAGGCTTATAATATTGTTTAGAGGACACTGGTCAGGGGGCAACGTATTCTGgtactgtattaatattatatgtatatacatgtatctGCGAGTCGTATCTTATGTgtcctgtgctgctgctgttaaatATAATCGAACTCCCTCGCGATCTGTTTTATTTCAAGGAGGGTGAAATAAAGGCCATTTCGTTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006191 True 3099 mRNA 0.37 11 17788983 17811459

Neighbor

gene id symbol gene type direction distance location
AMCG00006136 NA coding upstream 270150 17511902 ~ 17518833 (+)
AMCG00006150 NA coding upstream 667478 17104337 ~ 17121505 (+)
AMCG00006151 NA coding upstream 687122 17095682 ~ 17101861 (+)
AMCG00006130 NA coding upstream 712719 17070040 ~ 17076264 (+)
AMCG00006125 dapk3 coding upstream 871003 16908516 ~ 16917980 (+)
AMCG00006189 thop1,mepd coding downstream 40580 17852039 ~ 17877059 (+)
AMCG00006187 NA coding downstream 68524 17879983 ~ 17905624 (+)
AMCG00006162 LOC106613602 coding downstream 137064 17948523 ~ 17960210 (+)
AMCG00006164 NA coding downstream 193118 18004577 ~ 18008371 (+)
AMCG00006169 diras1,LOC106573976,LOC105906138,LOC106613605 coding downstream 305179 18116638 ~ 18130496 (+)
G156567 NA non-coding upstream 11113 17774665 ~ 17777870 (+)
G156564 LOC100846954,LOC107575789 non-coding upstream 80262 17707670 ~ 17708721 (+)
G156521 NA non-coding upstream 217451 17567559 ~ 17571532 (+)
G156509 NA non-coding upstream 241622 17535631 ~ 17547361 (+)
G156506 NA non-coding upstream 264233 17523234 ~ 17524750 (+)
G156598 NA non-coding downstream 30680 17842139 ~ 17843976 (+)
G156671 NA non-coding downstream 347381 18158840 ~ 18223148 (+)
G156769 NA non-coding downstream 931143 18742602 ~ 18749749 (+)
G156771 NA non-coding downstream 945467 18756926 ~ 18757205 (+)
G156772 NA non-coding downstream 945807 18757266 ~ 18757542 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 24755 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 53899 17662190 ~ 17735084 (+)
AMCG00006149 NA other upstream 661350 17123205 ~ 17127633 (+)
G156327 NA other upstream 1159801 16627793 ~ 16629182 (+)
AMCG00006089 NA other upstream 1643745 16123128 ~ 16145238 (+)
G156640 NA other downstream 162282 17973741 ~ 17980637 (+)
AMCG00006138 NA other downstream 378765 18190224 ~ 18356589 (+)
AMCG00006174 NA other downstream 666669 18478128 ~ 18480087 (+)

Expression


Co-expression Network