Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006193 |
| gene name | LOC107744650,LOC103355422 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 19984679 ~ 19988411 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase S-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006193 | True | 339 | mRNA | 0.55 | 2 | 19984679 | 19988411 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006194 | LOC106613507,LOC106574153 | coding | downstream | 62208 | 19895425 ~ 19922471 (-) |
| AMCG00006197 | NA | coding | downstream | 102762 | 19880050 ~ 19881917 (-) |
| AMCG00006196 | ptprd,LOC107559826,LOC107717167,LOC107744639 | coding | downstream | 109748 | 19871892 ~ 19874931 (-) |
| AMCG00006195 | LOC102214220 | coding | downstream | 125310 | 19824825 ~ 19859369 (-) |
| AMCG00006199 | NA | coding | downstream | 678539 | 19302660 ~ 19306140 (-) |
| G156979 | NA | non-coding | downstream | 179508 | 19804948 ~ 19805171 (-) |
| G156971 | NA | non-coding | downstream | 267000 | 19717173 ~ 19717679 (-) |
| G156947 | uhrf1,LOC107561590,LOC107742786,LOC107549364 | non-coding | downstream | 494838 | 19485550 ~ 19489841 (-) |
| G156946 | LOC107742786 | non-coding | downstream | 504242 | 19479468 ~ 19480437 (-) |
| G156935 | NA | non-coding | downstream | 571339 | 19402182 ~ 19413340 (-) |
| G157011 | NA | non-coding | upstream | 240175 | 20228586 ~ 20229103 (-) |
| G157020 | NA | non-coding | upstream | 366052 | 20354463 ~ 20354668 (-) |
| G157030 | NA | non-coding | upstream | 378178 | 20366589 ~ 20366830 (-) |
| G157038 | NA | non-coding | upstream | 430563 | 20418974 ~ 20419284 (-) |
| G157042 | NA | non-coding | upstream | 462061 | 20450472 ~ 20486674 (-) |
| AMCG00006201 | LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 | other | downstream | 521474 | 19448931 ~ 19463205 (-) |
| G156907 | NA | other | downstream | 690859 | 19275200 ~ 19293820 (-) |
| AMCG00006127 | NA | other | downstream | 3021029 | 16947997 ~ 16963650 (-) |
| G156341 | NA | other | downstream | 3303907 | 16651540 ~ 16680772 (-) |
| AMCG00006118 | NA | other | downstream | 3462990 | 16505364 ~ 16521689 (-) |
| G157059 | NA | other | upstream | 721388 | 20709799 ~ 20712216 (-) |
