G151896



Basic Information


Item Value
gene id G151896
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 35764 ~ 36393 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU191235
CACAAACTCAGTCTTCAGTCAGATTGGAGCGTTCATTGCAGTGCCTTTATCACATGTGATGTAGAGAGGAACAGTGCATCAAGGACATTCCAGAGTTCCTCTGACTCCATGctaaaagtcagagcttttGATACACgaagtcaaagatctggttataattagCATGTCATCTTGAAAGCTcactaagcagaatatatatcattagagGACAGACTTCACAGGTCAATACAaggattagggagcagacacTGTTTGgcattgtctccaagatgctcatcaTAAATGACAAACTACCTTCTGGACTGACTGTTGACTTGTTCTTACCTCTCTTAAGTATACGTGAAGAGGAATTTCTAGCTTTACTAATACTACACTGTTGTGTATCTATATACACAATACAGCAGTACATATATAACATGGATGTAATGTCTACATATAGACtactttttatatacatacacacaattttaaaatactacataAGATATGAACATATATACAACTTCTGTCATAAAgagtttgtgtatatatattctatacacCACAATATATAACTGGTGTAATACATTAATGGCAGCCACACAGGGCTGTCGACAGAgaccaacacaacacactgagaACACAGCTCTT

Function


GO:

id name namespace
GO:0009410 response to xenobiotic stimulus biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU191235 True 630 lncRNA 0.37 1 35764 36393

Neighbor


gene id symbol gene type direction distance location
AMCG00005404 NA coding downstream 31890 68283 ~ 75569 (+)
AMCG00005403 NA coding downstream 39828 76221 ~ 81269 (+)
AMCG00005402 NA coding downstream 53862 90255 ~ 91527 (+)
AMCG00005392 NA coding downstream 218665 255058 ~ 257046 (+)
AMCG00005393 NA coding downstream 220691 257084 ~ 258802 (+)
G151889 NA non-coding upstream 15949 19538 ~ 19815 (+)
G151938 NA non-coding downstream 71983 108376 ~ 111409 (+)
G151941 NA non-coding downstream 138859 175252 ~ 248119 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding downstream 319188 355581 ~ 355860 (+)
G151964 NA non-coding downstream 323700 360093 ~ 360292 (+)
G151968 NA non-coding downstream 499502 535895 ~ 536692 (+)
G151967 NA other downstream 362532 398925 ~ 399865 (+)
G151969 NA other downstream 500358 536751 ~ 537363 (+)
G152159 NA other downstream 1330621 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1340075 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1473109 1509502 ~ 1517580 (+)

Expression



Co-expression Network