G151903



Basic Information


Item Value
gene id G151903
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 35722 ~ 36395 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU191242
NNAAGAGCTGTGTtctcagtgtgttgtgttggtcTCTGTCGACAGCCCTGTGTGGCTGCCATTAATGTATTACACCAGTTATATATTGTGgtgtatagaatatatatacacaaactcTTTATGACAGAAGTTGTATATATGTTCATATCTtatgtagtattttaaaattgtgtgtatgtatataaaaagtaGTCTATATGTAGACATTACATCCATGTTATATATGTACTGCTGTATTGTGTATATAGATACACAACAGTGTAGTATTAGTAAAGCTAGAAATTCCTCTTCACGTATACTTAAGAGAGGTAAGAACAAGTCAACAGTCAGTCCAGAAGGTAGTTTGTCATTTAtgatgagcatcttggagacaatgcCAAACAgtgtctgctccctaatcctTGTATTGACCTGTGAAGTCTGTCctctaatgatatatattctgcttagtgAGCTTTCAAGATGACATGctaattataaccagatctttgacttcGTGTATCaaaagctctgacttttagCATGGAGTCAGAGGAACTCTGGAATGTCCTTGATGCACTGTTCCTCTCTACATCACATGTGATAAAGGCACTGCAATGAACGCTCCAATCTGACTGAAGACTGAGTTTGTGCCACATTACCATTATATACACTAGCATAGTATTGTTATAGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU191242 True 674 lncRNA 0.36 1 35722 36395

Neighbor


gene id symbol gene type direction distance location
AMCG00005405 orai2,LOC107081862 coding upstream 2185 38580 ~ 41030 (-)
AMCG00005409 NA coding upstream 4825 41220 ~ 42273 (-)
AMCG00005408 bckdk,LOC107681895,LOC107685622 coding upstream 6234 42629 ~ 53419 (-)
AMCG00005406 NA coding upstream 17813 54208 ~ 61323 (-)
AMCG00005397 gatsl2,LOC106567563,LOC106603747 coding upstream 44047 80442 ~ 90383 (-)
G151901 NA non-coding downstream 2911 31994 ~ 32811 (-)
G151891 NA non-coding downstream 15166 20300 ~ 20556 (-)
G151957 NA non-coding upstream 205759 242154 ~ 332344 (-)
G151970 NA non-coding upstream 310602 346997 ~ 350322 (-)
G151972 NA non-coding upstream 340960 377355 ~ 377713 (-)
G151979 NA non-coding upstream 654264 690659 ~ 690942 (-)
G152071 NA non-coding upstream 961959 998354 ~ 1009739 (-)
AMCG00005407 polr2j,LOC107587688 other upstream 25960 62355 ~ 67033 (-)
AMCG00005399 NA other upstream 57957 94352 ~ 99670 (-)
AMCG00005400 doc2b,LOC105895337,LOC107681901 other upstream 72003 108398 ~ 120547 (-)
G152133 NA other upstream 1182932 1219327 ~ 1335440 (-)
AMCG00005419 NA other upstream 1334947 1371342 ~ 1376473 (-)

Expression



Co-expression Network