G151938


Basic Information

Item Value
gene id G151938
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 108376 ~ 111409 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191290
ttttttagttttgttttccacatgcAGTCACATCTCCAGTCCACAGGACAGTCTGACAGGCAATGCGATAGCGTTCAGGTACAAAAAGTTTGTCTGTGAAGAAAAAGACTGACATTCCTGTAGcgtccagatttttttttctttttttttttctttttcacagaaaaaaacagcagtatCAAACATTTAGCAAATTTGTTGCATGACAAACCGATACATCTGCATGCATTTCCTTATAATATAGAAGTCAAGTACAAAGGCAAACAGATTGCAAAAAAATTTCACAAGTGTGGCAGGGTGGGACACCCCGCCTTGGGACTGGCCTGACAGCCAGTGAGGGGATGCCCGGCCCCTGGGGTGAGGGACCAGTGAGGGGATGCCCTGCCCCTGGCCactcactgtaaacactgcactgctttataccacacacacaatattggGACAGCTGCCCTTTGTGGAGGAAACATGAAAGCAATTGGCGAACGCCGCTTACCCATGAGGACAGGATCTCGTCATCAACGCACAGGGCTGTGAATAAAGTGTCTGACCAGAGAGCTGGGGAACAGCGCGACACAGTGGGGTCAGGGTGTCAGATTCAAGTGTCCAGTCTGCTGTCGACTCCTCCGGATCGCTCAACGGGCAGACTGGACACGACTGGACTCGGATCCTAACGTTAGCGAGCACAAGGTCAAATGGCCGCCTTGTTCCTCTCCTTCTGGTCGCTCTTAGGTTCAGCACACTAAGGAGGGGGAGGAAGCACGTGGGGCAGGGTTTTTGTGTCCTCCAGGTGTGGTGACACAGTGAGGGTCTGTGCAGGAGGGGACTGGAGCTGAGCGGTGGGAATAACAGGGGCCCCCAGGCCTGGCCAGGGCTACTCTGTTTAAAACATCAGTGAGGGCCGGAGGAGGGGCCCCgagtcaacaacaacaaccccccccacagcGCGTCAGTTTACATGCTGTGCTCGACTCACAGAGATCGATTCTTGCACTGGAGAGAAAACCACGCACTCAATTCCTCCTCTTTTGCTTTCTacaacgATAAGGGGCTTCAATAAATGGATTGAATAAACATCCCTGTGTGCCTGGGGAGACTGGGGGAGCGGAGACGACGGCAGAGGTACGAATCTGTCTGGTTGGCCATGAGAGGAGAAGAAAGTGAACACGGAGGCCCCAGTCCTGCAGCACTAACGGCCTGAGTCTGTCCCCGTGCACCGGGACTACTGGGTGTGACTCAGATCAGAGATGAATAAATATTGAACCATCTGCAACTATACAGCTCCCTGTGTCTTCCCCGTGTCCTGGGTTAATTAATGTCACGGAGCAATTAAACTCCGAGCGAGAATCAATCACCTCCTCTCAGGCTGCGGGCTTTAATGCGACCGTCCCTCTCCCTGCGCTGATCGATCAATATGCGATCCTGAGGCTCTCTGTCCCCCTCCCTTATGAGACTGAGCAGGTGAAACAGAGGAAACGGGTGGCACATGATGAACTGGGAAATAAAATGGGAAatcaagggagagagagagacagagcataTGTTCTGCCTCTCAGCTCAGCCACCAGAGTTTTCCCTGTTTCTTTCACAGGAtgaaaacattcataaatataatttttgaaCATGATCTCCATTCCTTCCTCAGGTTCACCTGGTCACTGAGGTCTCACTATAGATGTTATCTGCTCTCAGTCGGCTCACGAGCACAGTTGCACTAGTCTGGACGACACCGGATGAACAGAGCGCGTCACTTCTGCACCGAGAGAACCACTCAGTCTGCACACAAACCTCTCCCTGGTCGGTGAACGGCCTTTATTGAGCGAGTTTATGTGATATATTGCAAGCCAGAGGGTATTGATTAGCCTACAGACCAGTCGTCCTGAGCGCGGCACTGCCAGGCAGCCATGGGGCTGGAAATCAGTAGCGTCGCATATATTCCCACAAATCGAACTTTCTGCGGTTCTCCAGCTCCGcgtctcctctctgtgtccgGGGTTAATTCATGTCAGAGCAAATAAACGCCCTGATGAGCGCCGGTGTCACAGCCTGGGGCTGAAGCTTCCAGGACACGTGtgcggagggggggggggtgaatgaCTGAAAgaattactatatatatacagagagagagagagagagagagagaaagagagagagagcagacacTGTGATGCAATGAACAGAGAGGGCTTAAATCAGAATGACAGGGCTGATGGAGACAGCGACGGACAGAGCGGTGAGGATGTGAAGGACAGAAaccataaaaacacactgtTTCACACtaaacacgtgtgtgtgtgtaaatatacatatatatgtgtgtgcgtgtgtgtattacaaattccaattcagtCGCTTGTCTCTGCGCTCGTTGAAATGCAGGAGAGCCCAAGACAAGGGCCTCTCAGCCCAGCTTCTCTGGAAACGCTGATGGCGATGGAAGTCAGCAGATCCCACAGGTGCTCCCTTTCGTTTCCATGTGACAAACCCACCAACCaaccagcaaacaaacaaacaacttaaACAAGAAtagataaacagacaaacactgaCAGTGGAAGACGGGGGAGTCctcagggagagagggaggctggGCCGGGTTGTGCGTCACTTTACATTCAGAGGCACCACACATCCGCCACAAGAAGCGAGACACAGACGCTGGGCCCAGTGGCCTGACCTGCATGTGTTACAACATGGGAGTCACAAGGGGACTCCCTTACAccctgtgagtgagtgagtcgggggagagagtgtgagagggCAGGGGTCCGCATCTCCCTCACAGAGCAGGGCGATGGAGCTGAGGGAACCACAGGCCGAGCTGCTGCCAGTCCAGGAGGGGTGGGGCCTCAGTCGCTGAGCACAGAGCCAGGCAGTTCATTGGTCAGCGTGTGCCAGCGCTCGATCTTCTTGTCCTTATTTTTGAGGCAGTCGAACCAGTGCTTCAGCCGGTCCCCATGGGCGTTGATCCCCAGAGACACGCCGCCTGCCGGGGGCGAGAGGGCAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191290 True 3009 lncRNA 0.52 2 108376 111409

Neighbor

gene id symbol gene type direction distance location
AMCG00005402 NA coding upstream 16849 90255 ~ 91527 (+)
AMCG00005403 NA coding upstream 27107 76221 ~ 81269 (+)
AMCG00005404 NA coding upstream 32807 68283 ~ 75569 (+)
AMCG00005392 NA coding downstream 143649 255058 ~ 257046 (+)
AMCG00005393 NA coding downstream 145675 257084 ~ 258802 (+)
AMCG00005448 NA coding downstream 767558 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 795419 906828 ~ 925853 (+)
AMCG00005452 NA coding downstream 814789 926198 ~ 933420 (+)
G151896 NA non-coding upstream 71983 35764 ~ 36393 (+)
G151889 NA non-coding upstream 88561 19538 ~ 19815 (+)
G151941 NA non-coding downstream 63843 175252 ~ 248119 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding downstream 244172 355581 ~ 355860 (+)
G151964 NA non-coding downstream 248684 360093 ~ 360292 (+)
G151968 NA non-coding downstream 424486 535895 ~ 536692 (+)
G151978 NA non-coding downstream 579250 690659 ~ 690936 (+)
G151967 NA other downstream 287516 398925 ~ 399865 (+)
G151969 NA other downstream 425342 536751 ~ 537363 (+)
G152159 NA other downstream 1255605 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1265059 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1398093 1509502 ~ 1517580 (+)

Expression


Co-expression Network