G151941


Basic Information

Item Value
gene id G151941
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 175252 ~ 248119 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191294
tttttttttttctaaNNNNNNATCCTGGCCATGTTTCAAGTCTGCAGAAAAGGCATTTACAGAGTTGCATCAGCGGAGCCGCAGTTTGGGGCGACGTGTGGAAGCGCACGGCGGCGAATTCGACGCGGCAGTGTTTGTGGGGAGAAGGGCGGGGCTTTGATCTAAAAGCACGGGTTTCCTGGTTCGGCTCCCTCAGAGAGAGGGCCGCACACGCTGCCGGCTCAGCACTGCAACCCTTCACCCCTCCCGTCTGTTAGCAGTCTGGGTCAATCAGAACCAGCAGGGGAGCTcgggccgcccctgtagctcgAGAGAAGTCCTCGGCCAGAAGTGAAGGCCAGCAGGCCGCAGTGAAACACTGGTCTCGATGGGGAGACCTAGCCTGATAACCGAGAGTGCTGTTCCAGTTTCACACATATAGCACCTTCAAGCagaaaggaaagaggaaaaaactagaaaaattaagaacatgggctgaaaaaagaagaaatctgATTGCATAAAAGAAGACTTGAATAGACGAGTCTTTCTGTTTGAAACCCCAGGAAGGACAAGCGTACAAGATCTAAAGTGACCGCAGCGGGGGTCTGGGCGGTGCCGGTTCGAGACAGACGGAGAGCGGGGGGGCGGGCGGCGCTCGGGACGACATGCAGACCTCTCCTCAGGCGGCGGGGCGTCTGCCTCGGTCCTCGGGTCTTTGAAAACCAACGGAGCGGAACCGTGAGCAGGACTGGCGTGTCCTCGGCCGTCCTGCACTCAGTCCCACACATATGTACACAGTAGATACAGGCACTTAAAACGTCTTTGGTTGGAGTGAACCAACGTTGCAGAGAAATGCATTCACAGAGCTTTGCACCCTTTTCTGGGTTCAGTAGGCAACTAGTAAaatcagtttacatttttttagtgtttttcttgttttttaaaatgttttaaggtTTGTTTTCATCTCCTCGACATCCTTATCCTTCTGACAGAgccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191294 True 983 lncRNA 0.52 2 175252 248119

Neighbor

gene id symbol gene type direction distance location
AMCG00005402 NA coding upstream 83725 90255 ~ 91527 (+)
AMCG00005403 NA coding upstream 93983 76221 ~ 81269 (+)
AMCG00005404 NA coding upstream 99683 68283 ~ 75569 (+)
AMCG00005392 NA coding downstream 6939 255058 ~ 257046 (+)
AMCG00005393 NA coding downstream 8965 257084 ~ 258802 (+)
AMCG00005448 NA coding downstream 630848 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 658709 906828 ~ 925853 (+)
AMCG00005452 NA coding downstream 678079 926198 ~ 933420 (+)
G151938 NA non-coding upstream 63843 108376 ~ 111409 (+)
G151896 NA non-coding upstream 138859 35764 ~ 36393 (+)
G151889 NA non-coding upstream 155437 19538 ~ 19815 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding downstream 107462 355581 ~ 355860 (+)
G151964 NA non-coding downstream 111974 360093 ~ 360292 (+)
G151968 NA non-coding downstream 287776 535895 ~ 536692 (+)
G151978 NA non-coding downstream 442540 690659 ~ 690936 (+)
G152040 NA non-coding downstream 765959 1014078 ~ 1014380 (+)
G151967 NA other downstream 150806 398925 ~ 399865 (+)
G151969 NA other downstream 288632 536751 ~ 537363 (+)
G152159 NA other downstream 1118895 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1128349 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1261383 1509502 ~ 1517580 (+)

Expression


Co-expression Network