G151963 (LOC107691770,LOC107571976,LOC107709746)


Basic Information

Item Value
gene id G151963
gene name LOC107691770,LOC107571976,LOC107709746
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 355581 ~ 355860 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191330
CACCTTCAGGGTGGTGGTCCCCAGCTCCAGGCCGACCAGCACGCTCCTGTCCACCAGCTCGGCCACGCGGGGGTCGGCCACCTTCAGCGAGTCCTGGACCAGTTCCGTCACGTCCACCTGCCAGTCGGGCCCCAGCATGGTGATGACCTGGTCGGTGCCCTCGGTGGAGGTGGTGTGGAACTGGGTGAGAACTCGGACCAGTGAGTGCTGGTACTGCAGGGTGCAGCCGCGGCTCAGCTTGCGgtcctcctcgtcctcgtcctcacTGTCCCTGGCGCTC

Function

NR:

description
PREDICTED: transmembrane protein 132E isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191330 True 280 lncRNA 0.68 1 355581 355860

Neighbor

gene id symbol gene type direction distance location
AMCG00005393 NA coding upstream 96779 257084 ~ 258802 (+)
AMCG00005392 NA coding upstream 98535 255058 ~ 257046 (+)
AMCG00005402 NA coding upstream 264054 90255 ~ 91527 (+)
AMCG00005403 NA coding upstream 274312 76221 ~ 81269 (+)
AMCG00005404 NA coding upstream 280012 68283 ~ 75569 (+)
AMCG00005448 NA coding downstream 523107 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 550968 906828 ~ 925853 (+)
AMCG00005452 NA coding downstream 570338 926198 ~ 933420 (+)
AMCG00005449 LOC107103649 coding downstream 579874 935734 ~ 947232 (+)
AMCG00005453 NA coding downstream 597370 953230 ~ 956421 (+)
G151941 NA non-coding upstream 107462 175252 ~ 248119 (+)
G151938 NA non-coding upstream 244172 108376 ~ 111409 (+)
G151896 NA non-coding upstream 319188 35764 ~ 36393 (+)
G151889 NA non-coding upstream 335766 19538 ~ 19815 (+)
G151964 NA non-coding downstream 4233 360093 ~ 360292 (+)
G151968 NA non-coding downstream 180035 535895 ~ 536692 (+)
G151978 NA non-coding downstream 334799 690659 ~ 690936 (+)
G152040 NA non-coding downstream 658218 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 701325 1057185 ~ 1057395 (+)
G151967 NA other downstream 43065 398925 ~ 399865 (+)
G151969 NA other downstream 180891 536751 ~ 537363 (+)
G152159 NA other downstream 1011154 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1020608 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1153642 1509502 ~ 1517580 (+)

Expression


Co-expression Network