G151964


Basic Information

Item Value
gene id G151964
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 360093 ~ 360292 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191331
TCGGGCAGGATGGGGACCCTCCAGCCCTTGATGAGGCTGAGCCGGCTGTCAGACAGCTCCACCTGCAGGGGCAGCTTGGGCACCCACACAGTCAGCTCCAGAGGGGCGCTCAGGTGCTCGTAGCTGAACACCACCCTGGCGTTCATGGAGCCCCGCGTCTCCTTCCCGTTCACGAACACGTAGTCACAGCTGGAGGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191331 True 200 lncRNA 0.65 1 360093 360292

Neighbor

gene id symbol gene type direction distance location
AMCG00005393 NA coding upstream 101291 257084 ~ 258802 (+)
AMCG00005392 NA coding upstream 103047 255058 ~ 257046 (+)
AMCG00005402 NA coding upstream 268566 90255 ~ 91527 (+)
AMCG00005403 NA coding upstream 278824 76221 ~ 81269 (+)
AMCG00005404 NA coding upstream 284524 68283 ~ 75569 (+)
AMCG00005448 NA coding downstream 518675 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 546536 906828 ~ 925853 (+)
AMCG00005452 NA coding downstream 565906 926198 ~ 933420 (+)
AMCG00005449 LOC107103649 coding downstream 575442 935734 ~ 947232 (+)
AMCG00005453 NA coding downstream 592938 953230 ~ 956421 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 4233 355581 ~ 355860 (+)
G151941 NA non-coding upstream 111974 175252 ~ 248119 (+)
G151938 NA non-coding upstream 248684 108376 ~ 111409 (+)
G151896 NA non-coding upstream 323700 35764 ~ 36393 (+)
G151889 NA non-coding upstream 340278 19538 ~ 19815 (+)
G151968 NA non-coding downstream 175603 535895 ~ 536692 (+)
G151978 NA non-coding downstream 330367 690659 ~ 690936 (+)
G152040 NA non-coding downstream 653786 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 696893 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 884739 1245031 ~ 1253959 (+)
G151967 NA other downstream 38633 398925 ~ 399865 (+)
G151969 NA other downstream 176459 536751 ~ 537363 (+)
G152159 NA other downstream 1006722 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 1016176 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 1149210 1509502 ~ 1517580 (+)

Expression


Co-expression Network