G151968


Basic Information

Item Value
gene id G151968
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 535895 ~ 536692 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191335
TTTCTGACGAGcgccaacacacacagcaccagaGTCCCGCGGCGGATCCGGCGAGGGGTCATCGTAGACACCCCAGTAAATCCacagggaggaaaacaaaatcaagcacCTCTGGAGAGCGACGCGCTGAAGTTTGAGCGGTTACAGCCCGCGATCCTGAACTTCAGCCGTGGATCCGGGGGCAGCGGGCTCCCTGCGTTGGGATGCGCCTCAATCAATGAGCCTTGAGAGAGAAATAACAGGGGCTGGGGGGGGTCATCTTCCGCCACCAAAACACAAAGGCACGCAgggttgggggttggggggggatcCAAGGCGTGTGAAAAGTATCCGGATCAGGATCCCACAATTATGTCCCACTCCTCCCGACTGAAGCTGTTCACTCCGGCGGGCTGTGGGAAGCCCACTCGCGACCAGGGGCAACTGTAATCCTCGGGGGGACAGTCTGCGAAGGAAAGAAACACATTGTATTAGACGCGTCCTGGGCGCACAGTCCACAGCCCCCGCACCACGCAGGCAGCTCGGCTCTATTGTTCGCTCGTTTATGGTCCAGTGATGTGAGCAGACCGGGCTGATCCACAGCAGGGCGACGGAAATGCCCGTCCCGCACGCACTCCTCTCCGGGACAAAGCCTGGCGCACTGTGGGCAACTTTCACACGGCGGTGCCACCCGGAGCTCCTGCAGCAACAAACCAGGGTCCACTGTGCGCCTCCCGTGGGCTTGAGCTTGTGTTGAGGGAGCACAGCGAGCCGGCGTGTGGGCATCCACCCAGCGCAAAATCCACTGCCGACCCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191335 True 798 lncRNA 0.61 1 535895 536692

Neighbor

gene id symbol gene type direction distance location
AMCG00005393 NA coding upstream 277093 257084 ~ 258802 (+)
AMCG00005392 NA coding upstream 278849 255058 ~ 257046 (+)
AMCG00005402 NA coding upstream 444368 90255 ~ 91527 (+)
AMCG00005403 NA coding upstream 454626 76221 ~ 81269 (+)
AMCG00005404 NA coding upstream 460326 68283 ~ 75569 (+)
AMCG00005448 NA coding downstream 342275 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 370136 906828 ~ 925853 (+)
AMCG00005452 NA coding downstream 389506 926198 ~ 933420 (+)
AMCG00005449 LOC107103649 coding downstream 399042 935734 ~ 947232 (+)
AMCG00005453 NA coding downstream 416538 953230 ~ 956421 (+)
G151964 NA non-coding upstream 175603 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 180035 355581 ~ 355860 (+)
G151941 NA non-coding upstream 287776 175252 ~ 248119 (+)
G151938 NA non-coding upstream 424486 108376 ~ 111409 (+)
G151896 NA non-coding upstream 499502 35764 ~ 36393 (+)
G151978 NA non-coding downstream 153967 690659 ~ 690936 (+)
G152040 NA non-coding downstream 477386 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 520493 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 708339 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 921462 1458154 ~ 1458747 (+)
G151967 NA other upstream 136030 398925 ~ 399865 (+)
G151969 NA other downstream 59 536751 ~ 537363 (+)
G152159 NA other downstream 830322 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 839776 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 972810 1509502 ~ 1517580 (+)
G152267 NA other downstream 1209268 1745960 ~ 1748934 (+)

Expression


Co-expression Network