Gene
RNA
| Item | Value |
|---|---|
| gene id | G151979 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 690659 ~ 690942 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU191347 | True | 284 | lncRNA | 0.55 | 1 | 690659 | 690942 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005387 | tmem132e | coding | downstream | 289862 | 398920 ~ 400797 (-) |
| AMCG00005391 | NA | coding | downstream | 315647 | 350765 ~ 375012 (-) |
| AMCG00005395 | lig3,LOC102796838,LOC107587693,LOC105924869 | coding | downstream | 422969 | 260508 ~ 267690 (-) |
| AMCG00005394 | tmem248 | coding | downstream | 439486 | 248099 ~ 251173 (-) |
| AMCG00005396 | NA | coding | downstream | 458284 | 227258 ~ 232375 (-) |
| AMCG00005388 | NA | coding | upstream | 180215 | 871157 ~ 873005 (-) |
| AMCG00005454 | NA | coding | upstream | 280729 | 971671 ~ 973719 (-) |
| AMCG00005474 | NA | coding | upstream | 323710 | 1014652 ~ 1021117 (-) |
| AMCG00005476 | mdh2,LOC106908802,LOC103136570 | coding | upstream | 332093 | 1023035 ~ 1027249 (-) |
| AMCG00005475 | porb,LOC107728227,LOC107598574,LOC107703971,LOC108424088 | coding | upstream | 345154 | 1036096 ~ 1051408 (-) |
| G151972 | NA | non-coding | downstream | 312946 | 377355 ~ 377713 (-) |
| G151970 | NA | non-coding | downstream | 340337 | 346997 ~ 350322 (-) |
| G151957 | NA | non-coding | downstream | 358315 | 242154 ~ 332344 (-) |
| G151903 | NA | non-coding | downstream | 654264 | 35722 ~ 36395 (-) |
| G151901 | NA | non-coding | downstream | 657848 | 31994 ~ 32811 (-) |
| G152071 | NA | non-coding | upstream | 307412 | 998354 ~ 1009739 (-) |
| G152085 | NA | non-coding | upstream | 374517 | 1065459 ~ 1070656 (-) |
| G152178 | NA | non-coding | upstream | 706399 | 1397341 ~ 1398392 (-) |
| G152197 | NA | non-coding | upstream | 767295 | 1458237 ~ 1458662 (-) |
| G152320 | NA | non-coding | upstream | 1001807 | 1692749 ~ 1693555 (-) |
| AMCG00005400 | doc2b,LOC105895337,LOC107681901 | other | downstream | 570112 | 108398 ~ 120547 (-) |
| AMCG00005399 | NA | other | downstream | 590989 | 94352 ~ 99670 (-) |
| AMCG00005407 | polr2j,LOC107587688 | other | downstream | 623626 | 62355 ~ 67033 (-) |
| G152133 | NA | other | upstream | 528385 | 1219327 ~ 1335440 (-) |
| AMCG00005419 | NA | other | upstream | 680400 | 1371342 ~ 1376473 (-) |
| G152277 | NA | other | upstream | 814998 | 1505940 ~ 1507628 (-) |
| G152271 | NA | other | upstream | 830800 | 1521742 ~ 1615497 (-) |
| AMCG00005461 | eif4h | other | upstream | 1017741 | 1708683 ~ 1723500 (-) |
