Gene
RNA
| Item | Value |
|---|---|
| gene id | G152159 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 1367014 ~ 1367956 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU191585 | True | 489 | TUCP | 0.53 | 3 | 1367014 | 1367956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005416 | LOC108240947,LOC106533470 | coding | upstream | 7491 | 1342760 ~ 1359523 (+) |
| AMCG00005412 | NA | coding | upstream | 44419 | 1321808 ~ 1322595 (+) |
| AMCG00005414 | wbscr22 | coding | upstream | 61942 | 1301037 ~ 1305072 (+) |
| AMCG00005415 | LOC107573094,LOC107551239 | coding | upstream | 71566 | 1284287 ~ 1295448 (+) |
| AMCG00005411 | cux1,LOC105006988 | coding | upstream | 108889 | 1255042 ~ 1258125 (+) |
| AMCG00005413 | kctd7 | coding | downstream | 13785 | 1381741 ~ 1384590 (+) |
| AMCG00005424 | LOC106567664 | coding | downstream | 20732 | 1388688 ~ 1402701 (+) |
| AMCG00005425 | NA | coding | downstream | 35090 | 1403046 ~ 1406537 (+) |
| AMCG00005422 | trim37,LOC103132205,LOC106941548 | coding | downstream | 40477 | 1408433 ~ 1425336 (+) |
| AMCG00005423 | NA | coding | downstream | 101220 | 1469176 ~ 1480171 (+) |
| G152111 | NA | non-coding | upstream | 113055 | 1245031 ~ 1253959 (+) |
| G152053 | NA | non-coding | upstream | 309619 | 1057185 ~ 1057395 (+) |
| G152040 | NA | non-coding | upstream | 352634 | 1014078 ~ 1014380 (+) |
| G151978 | NA | non-coding | upstream | 676078 | 690659 ~ 690936 (+) |
| G151968 | NA | non-coding | upstream | 830322 | 535895 ~ 536692 (+) |
| G152196 | NA | non-coding | downstream | 90198 | 1458154 ~ 1458747 (+) |
| G152198 | NA | non-coding | downstream | 93768 | 1461724 ~ 1461939 (+) |
| G152397 | NA | non-coding | downstream | 887409 | 2255365 ~ 2323345 (+) |
| G152644 | NA | non-coding | downstream | 1703994 | 3071950 ~ 3090655 (+) |
| G152655 | NA | non-coding | downstream | 1815865 | 3183821 ~ 3186988 (+) |
| G151969 | NA | other | upstream | 829651 | 536751 ~ 537363 (+) |
| G151967 | NA | other | upstream | 967149 | 398925 ~ 399865 (+) |
| AMCG00005418 | NA | other | downstream | 8512 | 1376468 ~ 1379302 (+) |
| AMCG00005434 | NA | other | downstream | 141546 | 1509502 ~ 1517580 (+) |
| G152267 | NA | other | downstream | 378004 | 1745960 ~ 1748934 (+) |
| G152337 | NA | other | downstream | 431855 | 1799811 ~ 1803903 (+) |
| AMCG00005429 | ywhae,LOC106567579,LOC105005922 | other | downstream | 561499 | 1929455 ~ 1946800 (+) |
