G152320


Basic Information

Item Value
gene id G152320
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1692749 ~ 1693555 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191799
CTTTAGTGTCTCACCTCCAGCCTGCTCACCGTCTCCTCGTTCCCCACAATGTCGCACAGTTTCAGGGGTCTGTACTTCTCCACCCAGGGCAGGTCGTAGCCCGGGCTAGAGCCCTTTCCAGTCGCCGGCTCCGGCTTGGCCTGGGTCTCTCCCGTTCGGACCTGCTCGGTGTCGTCTGTTTTCATCTCCACCTCCATGGTGCCGTATTTCCACAACagtctctgcttctctctccccccgAAACTGCAGTCCGCTCGGATCTTCCCGCCACGGCCAGGACCCAGACAGCGTGCGGCGCGGTGACGTCAGACGCAGGGGGCGGGTCTCACTGTTGAAATTCTGACTTACCTGTGATCAGTCCTAGAGATGAGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191799 True 374 lncRNA 0.60 2 1692749 1693555

Neighbor

gene id symbol gene type direction distance location
AMCG00005447 LOC106580668 coding downstream 7289 1675244 ~ 1685460 (-)
AMCG00005446 NA coding downstream 26384 1660027 ~ 1666365 (-)
AMCG00005445 fzd9,LOC106567714,LOC106612580,LOC107713270,LOC107691950,LOC107709816 coding downstream 55253 1635745 ~ 1637496 (-)
AMCG00005438 NA coding downstream 117993 1570753 ~ 1574756 (-)
AMCG00005439 hip1,LOC102790400 coding downstream 155881 1523660 ~ 1536868 (-)
AMCG00005460 NA coding upstream 3722 1697277 ~ 1707786 (-)
AMCG00005462 NA coding upstream 61358 1754913 ~ 1774451 (-)
AMCG00005420 NA coding upstream 109362 1802917 ~ 1808080 (-)
AMCG00005421 lrrc75a,LOC107585608,LOC107664947,LOC108278186,LOC106935686,LOC107690424,LOC107744770 coding upstream 146012 1839567 ~ 1857205 (-)
AMCG00005431 NA coding upstream 255666 1949221 ~ 1956060 (-)
G152197 NA non-coding downstream 234087 1458237 ~ 1458662 (-)
G152178 NA non-coding downstream 294357 1397341 ~ 1398392 (-)
G152085 NA non-coding downstream 622093 1065459 ~ 1070656 (-)
G152071 NA non-coding downstream 683010 998354 ~ 1009739 (-)
G151979 NA non-coding downstream 1001807 690659 ~ 690942 (-)
G152335 NA non-coding upstream 52398 1745953 ~ 1752738 (-)
G152344 ywhae,LOC105005922,LOC106567579 non-coding upstream 247468 1941023 ~ 1946800 (-)
G152424 NA non-coding upstream 474049 2167604 ~ 2175954 (-)
G152452 mate4,LOC107718064,LOC107718062,LOC107699952,LOC106604060 non-coding upstream 601278 2294833 ~ 2318672 (-)
G152473 NA non-coding upstream 721517 2415072 ~ 2445097 (-)
G152271 NA other downstream 77252 1521742 ~ 1615497 (-)
G152277 NA other downstream 185121 1505940 ~ 1507628 (-)
AMCG00005419 NA other downstream 316276 1371342 ~ 1376473 (-)
G152133 NA other downstream 357309 1219327 ~ 1335440 (-)
AMCG00005400 doc2b,LOC105895337,LOC107681901 other downstream 1572202 108398 ~ 120547 (-)
AMCG00005461 eif4h other upstream 15128 1708683 ~ 1723500 (-)
AMCG00005532 NA other upstream 503799 2197354 ~ 2329684 (-)
AMCG00005517 NA other upstream 712970 2406525 ~ 2410247 (-)
AMCG00005491 supt6h,LOC107603297 other upstream 1178951 2872506 ~ 2890448 (-)
G152645 NA other upstream 1378305 3071860 ~ 3090714 (-)

Expression


Co-expression Network