Gene
RNA
| Item | Value |
|---|---|
| gene id | G152397 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 2255365 ~ 2323345 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU191902 | True | 565 | lncRNA | 0.50 | 2 | 2255365 | 2323345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005531 | LOC108430460 | coding | upstream | 6990 | 2223110 ~ 2248375 (+) |
| AMCG00005529 | sebox | coding | upstream | 40080 | 2213213 ~ 2215285 (+) |
| AMCG00005530 | nle1,LOC107720672 | coding | upstream | 45875 | 2202429 ~ 2209490 (+) |
| AMCG00005528 | NA | coding | upstream | 54384 | 2174065 ~ 2200981 (+) |
| AMCG00005527 | pitpnab,LOC108410689,LOC105890453,LOC101470402,LOC100703534,LOC103045464 | coding | upstream | 84736 | 2157962 ~ 2170629 (+) |
| AMCG00005518 | typx,nxn,LOC106612785 | coding | downstream | 20849 | 2344194 ~ 2349944 (+) |
| AMCG00005514 | nxn | coding | downstream | 63798 | 2387143 ~ 2404764 (+) |
| AMCG00005516 | NA | coding | downstream | 85212 | 2408557 ~ 2409948 (+) |
| AMCG00005515 | LOC102196260 | coding | downstream | 87222 | 2410567 ~ 2415588 (+) |
| AMCG00005513 | NA | coding | downstream | 93733 | 2417078 ~ 2445083 (+) |
| G152198 | NA | non-coding | upstream | 793426 | 1461724 ~ 1461939 (+) |
| G152196 | NA | non-coding | upstream | 796618 | 1458154 ~ 1458747 (+) |
| G152111 | NA | non-coding | upstream | 1001406 | 1245031 ~ 1253959 (+) |
| G152053 | NA | non-coding | upstream | 1197970 | 1057185 ~ 1057395 (+) |
| G152040 | NA | non-coding | upstream | 1240985 | 1014078 ~ 1014380 (+) |
| G152644 | NA | non-coding | downstream | 748605 | 3071950 ~ 3090655 (+) |
| G152655 | NA | non-coding | downstream | 860476 | 3183821 ~ 3186988 (+) |
| G152656 | NA | non-coding | downstream | 875987 | 3199332 ~ 3200187 (+) |
| G152657 | NA | non-coding | downstream | 936865 | 3260210 ~ 3260429 (+) |
| G152764 | NA | non-coding | downstream | 1400568 | 3723913 ~ 3761827 (+) |
| AMCG00005429 | ywhae,LOC106567579,LOC105005922 | other | upstream | 308565 | 1929455 ~ 1946800 (+) |
| G152337 | NA | other | upstream | 451462 | 1799811 ~ 1803903 (+) |
| G152267 | NA | other | upstream | 506431 | 1745960 ~ 1748934 (+) |
| AMCG00005434 | NA | other | upstream | 737785 | 1509502 ~ 1517580 (+) |
| AMCG00005418 | NA | other | upstream | 876063 | 1376468 ~ 1379302 (+) |
| AMCG00005481 | dynll2a,LOC107554284,LOC103397138 | other | downstream | 180565 | 2503910 ~ 2510676 (+) |
| G152588 | rpl23a | other | downstream | 521872 | 2845217 ~ 2849608 (+) |
| AMCG00005498 | lyrm9,LOC102789908 | other | downstream | 943029 | 3266374 ~ 3270844 (+) |
| AMCG00005538 | NA | other | downstream | 1959172 | 4282517 ~ 4305156 (+) |
| AMCG00005546 | acaca,LOC107691719 | other | downstream | 2236868 | 4560213 ~ 4563020 (+) |
