Gene
RNA
| Item | Value |
|---|---|
| gene id | G152644 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 3071950 ~ 3090655 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04360 | Axon guidance |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192219 | True | 309 | lncRNA | 0.42 | 2 | 3071950 | 3090655 |
| TU192220 | False | 299 | lncRNA | 0.42 | 2 | 3071950 | 3090655 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005490 | sdf2,LOC106602908 | coding | upstream | 175281 | 2893305 ~ 2896669 (+) |
| AMCG00005492 | NA | coding | upstream | 200077 | 2866971 ~ 2871873 (+) |
| AMCG00005494 | rab34,LOC108443499,LOC102306323,LOC102777300,LOC108278203 | coding | upstream | 214838 | 2850092 ~ 2857112 (+) |
| AMCG00005493 | NA | coding | upstream | 227249 | 2834497 ~ 2844701 (+) |
| AMCG00005502 | synrg,LOC107727910 | coding | upstream | 433042 | 2583399 ~ 2638908 (+) |
| AMCG00005509 | NA | coding | downstream | 61026 | 3151681 ~ 3171935 (+) |
| AMCG00005506 | NA | coding | downstream | 82924 | 3173579 ~ 3179680 (+) |
| AMCG00005507 | nlk | coding | downstream | 110846 | 3201501 ~ 3202760 (+) |
| AMCG00005508 | nlk,nlk2,LOC107682651,LOC107756449,LOC107666197 | coding | downstream | 139034 | 3229689 ~ 3256106 (+) |
| AMCG00005499 | NA | coding | downstream | 194215 | 3284870 ~ 3295314 (+) |
| G152397 | NA | non-coding | upstream | 748605 | 2255365 ~ 2323345 (+) |
| G152198 | NA | non-coding | upstream | 1610011 | 1461724 ~ 1461939 (+) |
| G152196 | NA | non-coding | upstream | 1613203 | 1458154 ~ 1458747 (+) |
| G152111 | NA | non-coding | upstream | 1817991 | 1245031 ~ 1253959 (+) |
| G152053 | NA | non-coding | upstream | 2014555 | 1057185 ~ 1057395 (+) |
| G152655 | NA | non-coding | downstream | 93166 | 3183821 ~ 3186988 (+) |
| G152656 | NA | non-coding | downstream | 108677 | 3199332 ~ 3200187 (+) |
| G152657 | NA | non-coding | downstream | 169555 | 3260210 ~ 3260429 (+) |
| G152764 | NA | non-coding | downstream | 633258 | 3723913 ~ 3761827 (+) |
| G152866 | NA | non-coding | downstream | 1168211 | 4258866 ~ 4260635 (+) |
| G152588 | rpl23a | other | upstream | 222342 | 2845217 ~ 2849608 (+) |
| AMCG00005481 | dynll2a,LOC107554284,LOC103397138 | other | upstream | 561274 | 2503910 ~ 2510676 (+) |
| AMCG00005429 | ywhae,LOC106567579,LOC105005922 | other | upstream | 1125150 | 1929455 ~ 1946800 (+) |
| G152337 | NA | other | upstream | 1268047 | 1799811 ~ 1803903 (+) |
| G152267 | NA | other | upstream | 1323016 | 1745960 ~ 1748934 (+) |
| AMCG00005498 | lyrm9,LOC102789908 | other | downstream | 175719 | 3266374 ~ 3270844 (+) |
| AMCG00005538 | NA | other | downstream | 1191862 | 4282517 ~ 4305156 (+) |
| AMCG00005546 | acaca,LOC107691719 | other | downstream | 1469558 | 4560213 ~ 4563020 (+) |
| AMCG00005583 | LOC106603777,LOC105895333,LOC108428505 | other | downstream | 2124158 | 5214813 ~ 5241776 (+) |
| AMCG00005647 | NA | other | downstream | 3343866 | 6434521 ~ 6437078 (+) |
