Gene
RNA
| Item | Value |
|---|---|
| gene id | G152656 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 3199332 ~ 3200187 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192235 | True | 856 | lncRNA | 0.58 | 1 | 3199332 | 3200187 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005506 | NA | coding | upstream | 19652 | 3173579 ~ 3179680 (+) |
| AMCG00005509 | NA | coding | upstream | 27397 | 3151681 ~ 3171935 (+) |
| AMCG00005490 | sdf2,LOC106602908 | coding | upstream | 302663 | 2893305 ~ 2896669 (+) |
| AMCG00005492 | NA | coding | upstream | 327459 | 2866971 ~ 2871873 (+) |
| AMCG00005494 | rab34,LOC108443499,LOC102306323,LOC102777300,LOC108278203 | coding | upstream | 342220 | 2850092 ~ 2857112 (+) |
| AMCG00005507 | nlk | coding | downstream | 1314 | 3201501 ~ 3202760 (+) |
| AMCG00005508 | nlk,nlk2,LOC107682651,LOC107756449,LOC107666197 | coding | downstream | 29502 | 3229689 ~ 3256106 (+) |
| AMCG00005499 | NA | coding | downstream | 84683 | 3284870 ~ 3295314 (+) |
| AMCG00005500 | NA | coding | downstream | 104702 | 3304889 ~ 3306844 (+) |
| AMCG00005522 | NA | coding | downstream | 433546 | 3633733 ~ 3637811 (+) |
| G152655 | NA | non-coding | upstream | 12344 | 3183821 ~ 3186988 (+) |
| G152644 | NA | non-coding | upstream | 108677 | 3071950 ~ 3090655 (+) |
| G152397 | NA | non-coding | upstream | 875987 | 2255365 ~ 2323345 (+) |
| G152198 | NA | non-coding | upstream | 1737393 | 1461724 ~ 1461939 (+) |
| G152196 | NA | non-coding | upstream | 1740585 | 1458154 ~ 1458747 (+) |
| G152657 | NA | non-coding | downstream | 60023 | 3260210 ~ 3260429 (+) |
| G152764 | NA | non-coding | downstream | 523726 | 3723913 ~ 3761827 (+) |
| G152866 | NA | non-coding | downstream | 1058679 | 4258866 ~ 4260635 (+) |
| G152906 | NA | non-coding | downstream | 1091843 | 4292030 ~ 4292882 (+) |
| G152943 | NA | non-coding | downstream | 1332134 | 4532321 ~ 4534824 (+) |
| G152588 | rpl23a | other | upstream | 349724 | 2845217 ~ 2849608 (+) |
| AMCG00005481 | dynll2a,LOC107554284,LOC103397138 | other | upstream | 688656 | 2503910 ~ 2510676 (+) |
| AMCG00005429 | ywhae,LOC106567579,LOC105005922 | other | upstream | 1252532 | 1929455 ~ 1946800 (+) |
| G152337 | NA | other | upstream | 1395429 | 1799811 ~ 1803903 (+) |
| G152267 | NA | other | upstream | 1450398 | 1745960 ~ 1748934 (+) |
| AMCG00005498 | lyrm9,LOC102789908 | other | downstream | 66187 | 3266374 ~ 3270844 (+) |
| AMCG00005538 | NA | other | downstream | 1082330 | 4282517 ~ 4305156 (+) |
| AMCG00005546 | acaca,LOC107691719 | other | downstream | 1360026 | 4560213 ~ 4563020 (+) |
| AMCG00005583 | LOC106603777,LOC105895333,LOC108428505 | other | downstream | 2014626 | 5214813 ~ 5241776 (+) |
| AMCG00005647 | NA | other | downstream | 3234334 | 6434521 ~ 6437078 (+) |
