G152764


Basic Information

Item Value
gene id G152764
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 3723913 ~ 3761827 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU192366
atatatatatatcctgtacattttttttttttaagcggAGGAATcctattttcttgttttaatggTGTAAATATTAAACTCATGGTGTCAGAGATCCCTAAGATTTCCAGCACACTGGGAAACATGTCCAGAAATTGCCAGACATTTCTGTTGGTGTTCCACCAGCTCGGCCTCTACAGCGTAGGACTGGAACCATATCTGAGGCGCTGCTGTATCGATGACATTTTTTTGTAGTGCAAAACGTTTGCTCACCGTGACCATACAGTGTTAAAATCGATCTATTTTTCTGGCTAAACAATCTGAGCCTTGACAATAACCAATGCTTCAATGGAAGTATGGAATGTGAAATGGTTTATTTCTTCATTAAGTGCTCTCTGAGGTGAAAGCTTCAATATTGCCGTTCGATAAGAGGTTAAGGTTACAATTGTAATATTCATGTAGTTTATATTTGTTAGTGCGTCTGTTCTGCTGAGCAGCCTCatctaaatcaaaatgcaagtgagaatttagtttttagttttttcccagCAGTGCAATCTAAACACTATAATCCATGACGGCATCTGCGGTCTATAACACACAGCTGAGAATGTGTAAAACTACATCTAGTCTAAGTCTAAGTGTGTGCATCACCGGGACAAAGGCTGCTTACTTTAGTATTCAAACCCGAGGAATCGAATGTGATGCAAGATAAAGGAACCACGCTGATAGTATCTTGCCCACATCCAGTGCTGTAAATGAGCTGTCGATTGCTGGCAGTGGTGCGAttggtctttattttaaatgtttgttttgtaaatggatTTCCGAAGTAGCTATGGATCTCTCACAATGTACactctttgaaaaacaaaagcaaacattttgattttcaaagtatttagtatttagggAGCTTTTACAAGATGGTCAGGAAACTTTGGTggcttttttaaaattttggtttggtttcttgtttttttttttttagtagctTTGCAATGCTGAACTGTAACTCATACAGAGAAACAATGTTGGCAATAACTGTGAATTCTCAAAATCATAAGTGATGCCAAAGATACTTTATAGGATTCAAGCAAGGcagtttttttttttttttttttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192366 True 1106 lncRNA 0.36 2 3723913 3761827

Neighbor

gene id symbol gene type direction distance location
AMCG00005551 wsb1,LOC107756317,LOC107746651,LOC107682796,LOC107592922,LOC107587373,LOC107672108 coding upstream 1017 3706653 ~ 3722896 (+)
AMCG00005523 NA coding upstream 71198 3648847 ~ 3652715 (+)
AMCG00005526 NA coding upstream 79792 3642889 ~ 3644121 (+)
AMCG00005522 NA coding upstream 86102 3633733 ~ 3637811 (+)
AMCG00005500 NA coding upstream 417069 3304889 ~ 3306844 (+)
AMCG00005558 NA coding downstream 4187 3766014 ~ 3788578 (+)
AMCG00005559 NA coding downstream 37440 3799267 ~ 3807613 (+)
AMCG00005557 NA coding downstream 115587 3877414 ~ 3878187 (+)
AMCG00005556 LOC107690467,LOC107718289,LOC107664918,LOC107743726,LOC108425789,LOC107585604 coding downstream 124506 3886333 ~ 3889661 (+)
AMCG00005567 LOC107718289,LOC105897181 coding downstream 156529 3918356 ~ 3993279 (+)
G152657 NA non-coding upstream 463484 3260210 ~ 3260429 (+)
G152656 NA non-coding upstream 523726 3199332 ~ 3200187 (+)
G152655 NA non-coding upstream 536925 3183821 ~ 3186988 (+)
G152644 NA non-coding upstream 633258 3071950 ~ 3090655 (+)
G152397 NA non-coding upstream 1400568 2255365 ~ 2323345 (+)
G152866 NA non-coding downstream 497039 4258866 ~ 4260635 (+)
G152906 NA non-coding downstream 530203 4292030 ~ 4292882 (+)
G152943 NA non-coding downstream 770494 4532321 ~ 4534824 (+)
G153080 NA non-coding downstream 1428700 5190527 ~ 5190796 (+)
G153082 NA non-coding downstream 1433961 5195788 ~ 5201535 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 453069 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 874305 2845217 ~ 2849608 (+)
AMCG00005481 dynll2a,LOC107554284,LOC103397138 other upstream 1213237 2503910 ~ 2510676 (+)
AMCG00005429 ywhae,LOC106567579,LOC105005922 other upstream 1777113 1929455 ~ 1946800 (+)
G152337 NA other upstream 1920010 1799811 ~ 1803903 (+)
AMCG00005538 NA other downstream 520690 4282517 ~ 4305156 (+)
AMCG00005546 acaca,LOC107691719 other downstream 798386 4560213 ~ 4563020 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other downstream 1452986 5214813 ~ 5241776 (+)
AMCG00005647 NA other downstream 2672694 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 2725891 6487718 ~ 6488782 (+)

Expression


Co-expression Network