G153342


Basic Information

Item Value
gene id G153342
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6081235 ~ 6082866 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU193087
CGCTGTCCAGACCTACCTGCATCAGCTTCCCTTCCGCGGAGCCCTTCGCCTTGTCTCCCGCGAACACCCCCTCCAGGGTGATGGACTTGCCCGGCGGCTCCTGCTTCACCAGGGTCACCTTGATGACAGCCTTGGGCGCCGAGCGCTCCGTCTCCACCGCGGCCGCCAACTCCAGCCCCGCCTGCCCGAGCACCACCTGCAGGGCCGCCATGACCAGCCACGGCCAGAGCCCGGCCAGTTGCCGCGGAGTGAGGGTCATTGCACCGGCTGCAGCGGCGGGCCCCAGCCGCACATTGTGCACTGCAAAGCGGTCAACCTACTCGGGTTACTCGGCCAGCAAAGTagagaagaggagaaggagagggcaAATCCAGCGCTTTTCCGACACCTTCAAGAGTGTCCAACAGCCTGTGCAAGTCCGAGTTGTATCCAAGGATGAGTACACGTGGGTTGTAGCAACAAAATCCAAACTTTTATTAATGGATCACAGGTTCAAAGTTGTTATCTTGTATCCCAAACCGTGTGTGGTCGGCTGATTTAAGATGCACTGCGGACGTCTAATTCGCCAGCATGAGTGCAGTTGTAACCGTGATGCCCATTCTGTTTTCGGGCGAACACGTTATTTTGCTccagaaaacattgcaaacAAGACACGCAGGAAAGGCCAGACATTGTCTCCACACATGAGACGACATGATCGCATGCAAAAGCAGGTTCAAAGTATGCAGGGACACCTCCGTCTCGCTGGACACATTTTAAGATGTCCCATTCCCCGCTGGCCGTCTCATCTGCCTTTTCTCCAGCGGGGCGGTCAATCCACGCTTCGAAAGCCGCGGATGTGTGCTTTCCAAGGGTTTAGTACAGAGTTGCATGAGGCTTTATAAAAACCCCTTTCGGAAATGTGTAGCAGGACAGAAATATGATGACCCCCCCCCGCTGTAAACACTGGACACGGGTCATGCCTGGCTGGAACAACTCAATGAGAAAAACACGTTGTATTTAATCCACACGTCCCACAATGACAGCAGTGGTTTGAAAACTCCTCCAGAGCAAATCCCTGTGTCGAAACAGGCGTGAAACTGCGCAAATATCCACCGTGGGTGCGTGCAACCAACCCAGGACGAGAGCCGGTGGCTGCAGCGTGTTGTGCTGcttgcaaaagttttagaaaagaCCCGTAACTTCAGCAAGCAAATCCGTGGAGCTCAGAGCTCTGGTGCGCAGGGGGGACGTTTATTGACTCGTATGCAATGAAGCTGATCAATCATGATCCAGGCACGCTTTCCCCCCGATGACTGTTCAGACCTACTCGGGATTTCTCCCGCAGCTGAAACTTGATCAGTCCCCGCATGTCAGATCCACCCGCAATCCTTCCGCAACGACTTCATTTCAGACGTGGAAATCCCTGCgtaccgagagagagagagagagagagagagagagaaacaaatccaATAGGTATCAATAAAGTGTGTCCAAAGGCGGTTTTAAAGTCGTGTCGGATCTCGATGCGGGTGAAATGAGTCCCAAGAGGGGTCTCGGAGGATCAATCGGGCAGAAGAGCAGACGTTTGCGCGGAGAAAGGCAGCCGATTGGCAATGTCTGCTTTGCCTGCTCCCAGCCTGCCTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193087 True 1632 TUCP 0.54 1 6081235 6082866

Neighbor

gene id symbol gene type direction distance location
AMCG00005601 supt4h1 coding downstream 8569 6070192 ~ 6072666 (-)
AMCG00005611 NA coding downstream 133918 5936815 ~ 5947317 (-)
AMCG00005610 LOC101160255,LOC103021402,LOC100700540,LOC105025792 coding downstream 150079 5920200 ~ 5931156 (-)
AMCG00005605 NA coding downstream 329797 5748776 ~ 5751438 (-)
AMCG00005606 NA coding downstream 371780 5666860 ~ 5709455 (-)
AMCG00005598 hpda,LOC108413266,LOC108260398 coding upstream 75859 6158725 ~ 6170298 (-)
AMCG00005629 NA coding upstream 164284 6247150 ~ 6255757 (-)
AMCG00005638 NA coding upstream 205603 6288469 ~ 6296947 (-)
AMCG00005642 NA coding upstream 222967 6305833 ~ 6309531 (-)
AMCG00005640 NA coding upstream 226690 6309556 ~ 6317063 (-)
G153324 NA non-coding downstream 12221 6068787 ~ 6069014 (-)
G153313 NA non-coding downstream 32765 6048130 ~ 6048470 (-)
G153272 NA non-coding downstream 280329 5800648 ~ 5800906 (-)
G153248 dhx33 non-coding downstream 332663 5741492 ~ 5748572 (-)
G153236 NA non-coding downstream 432526 5648358 ~ 5648709 (-)
G153373 NA non-coding upstream 151262 6234128 ~ 6234359 (-)
G153374 NA non-coding upstream 151682 6234548 ~ 6234858 (-)
G153375 NA non-coding upstream 152317 6235183 ~ 6235409 (-)
G153379 NA non-coding upstream 157536 6240402 ~ 6257172 (-)
G153487 NA non-coding upstream 478073 6560939 ~ 6563570 (-)
G153130 NA other downstream 779037 5300769 ~ 5302198 (-)
AMCG00005539 NA other downstream 1788364 4284717 ~ 4292871 (-)
AMCG00005560 LOC106568075,LOC104946632,LOC106603282 other downstream 2212026 3850136 ~ 3869209 (-)
AMCG00005525 LOC106567758 other downstream 2448523 3606961 ~ 3632712 (-)
G152645 NA other downstream 2990521 3071860 ~ 3090714 (-)
AMCG00005628 LOC107090330,LOC102220786 other upstream 149293 6232159 ~ 6234028 (-)
AMCG00005674 NA other upstream 407389 6490255 ~ 6496571 (-)
AMCG00005685 NA other upstream 1026352 7109218 ~ 7145807 (-)
G153733 auts2 other upstream 1702688 7785554 ~ 7788321 (-)
AMCG00005704 NA other upstream 1916470 7999336 ~ 8001405 (-)

Expression


Co-expression Network