G153586


Basic Information

Item Value
gene id G153586
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6935430 ~ 6935676 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU193418
GGTCGTCCTCATTAAACTGACTGATGCTTGAATTCGGAGTGAATTTCCAGCCGGAGTGGTGGGGTCTCGATGCGGGGGTGTTTGGCTGGCCTGGCCTGGGCCTCTGTAGGTCTCGGTGCTGGAAAGACTCGGAGGGGTGTGGCTGACTGTAAAACGACTGCAGCTCGGCCCGTGGGTAGGCCTGGCTGGTATTCGTTTTGTTGGGAAACGCTCCACTACTGTTAGGAAAGATGCTTTGTTTGGTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193418 True 247 lncRNA 0.55 1 6935430 6935676

Neighbor

gene id symbol gene type direction distance location
AMCG00005631 NA coding downstream 3564 6924049 ~ 6931866 (-)
AMCG00005632 NA coding downstream 14569 6909318 ~ 6920861 (-)
AMCG00005655 abr,LOC107731041,LOC107688618,LOC107712163 coding downstream 62564 6825929 ~ 6872866 (-)
AMCG00005654 abr,si:ch211-253h3.1,LOC103375456 coding downstream 134591 6787860 ~ 6800839 (-)
AMCG00005645 NA coding downstream 192209 6722947 ~ 6743221 (-)
AMCG00005633 tmem211,LOC103045102,LOC108427286,LOC101167817,LOC106534416,LOC106603516 coding upstream 4136 6939812 ~ 6944352 (-)
AMCG00005678 LOC106567973,LOC106603516,LOC107685783,LOC107712159,LOC107595527 coding upstream 80872 7016548 ~ 7016940 (-)
AMCG00005676 NA coding upstream 82269 7017945 ~ 7022898 (-)
AMCG00005677 NA coding upstream 88509 7024185 ~ 7037056 (-)
AMCG00005680 ints2,LOC107744627 coding upstream 102007 7037683 ~ 7048482 (-)
G153514 NA non-coding downstream 272934 6647316 ~ 6662496 (-)
G153487 NA non-coding downstream 371860 6560939 ~ 6563570 (-)
G153379 NA non-coding downstream 678258 6240402 ~ 6257172 (-)
G153375 NA non-coding downstream 700021 6235183 ~ 6235409 (-)
G153374 NA non-coding downstream 700572 6234548 ~ 6234858 (-)
G153638 NA non-coding upstream 117129 7052805 ~ 7053559 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding upstream 243952 7179628 ~ 7202286 (-)
G153681 NA non-coding upstream 342828 7278504 ~ 7278765 (-)
G153742 NA non-coding upstream 939111 7874787 ~ 7875042 (-)
G153778 cct6a non-coding upstream 1046354 7982030 ~ 7983931 (-)
AMCG00005674 NA other downstream 438859 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 701402 6232159 ~ 6234028 (-)
G153342 NA other downstream 852564 6081235 ~ 6082866 (-)
G153130 NA other downstream 1633232 5300769 ~ 5302198 (-)
AMCG00005539 NA other downstream 2642559 4284717 ~ 4292871 (-)
AMCG00005685 NA other upstream 173542 7109218 ~ 7145807 (-)
G153733 auts2 other upstream 849878 7785554 ~ 7788321 (-)
AMCG00005704 NA other upstream 1063660 7999336 ~ 8001405 (-)
G153806 NA other upstream 1156072 8091748 ~ 8124685 (-)
G154142 NA other upstream 2154746 9090422 ~ 9092573 (-)

Expression


Co-expression Network