G153742


Basic Information

Item Value
gene id G153742
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7874787 ~ 7875042 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU193615
TGTTAATCAGGGTCACAATGCCGATCTGTACACTGTCAGTATGTCAGAAAGAAACATCACATAAAAGTCACATAAACCTGaagcactgaaaataaaacctccTTCTATAAGCATCACAACTTTGTGGACTAACAACATATTCCAGCAGCACAATGTGTTCAGTGTCATTAGAGAATATCGTGCATCGTTACATACTCTGACTTGGATCTTTCTCTTAAGAAAGTTTCCGCCCCAGTGCTGCTTTCACTtatgcaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC107661227

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193615 True 256 lncRNA 0.39 1 7874787 7875042

Neighbor

gene id symbol gene type direction distance location
AMCG00005692 caln1,LOC108277467,LOC107582596,LOC107554278,LOC107672359 coding downstream 5567 7852666 ~ 7869220 (-)
AMCG00005691 caln1,LOC107716051,LOC107659935,LOC107582596,LOC107672359,LOC107554278,LOC103034584 coding downstream 46235 7821194 ~ 7828552 (-)
AMCG00005698 NA coding downstream 406287 7467691 ~ 7468500 (-)
AMCG00005659 NA coding downstream 582415 7281620 ~ 7292372 (-)
AMCG00005688 cltc,cltcb,LOC108443353,LOC105907438 coding downstream 598307 7243950 ~ 7276480 (-)
AMCG00005718 NA coding upstream 21304 7896346 ~ 7901372 (-)
AMCG00005715 LOC102799651,LOC107659914,LOC104957508 coding upstream 43637 7918679 ~ 7950134 (-)
AMCG00005716 NA coding upstream 79089 7954131 ~ 7966260 (-)
AMCG00005717 psph coding upstream 101016 7976058 ~ 7977780 (-)
AMCG00005702 phkg1,LOC107677094,LOC107747678 coding upstream 114314 7989356 ~ 7999100 (-)
G153681 NA non-coding downstream 596022 7278504 ~ 7278765 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 672501 7179628 ~ 7202286 (-)
G153638 NA non-coding downstream 821228 7052805 ~ 7053559 (-)
G153586 NA non-coding downstream 939111 6935430 ~ 6935676 (-)
G153514 NA non-coding downstream 1212291 6647316 ~ 6662496 (-)
G153778 cct6a non-coding upstream 106988 7982030 ~ 7983931 (-)
G153779 NA non-coding upstream 109198 7984240 ~ 8021640 (-)
G153980 NA non-coding upstream 699150 8574192 ~ 8588222 (-)
G154010 NA non-coding upstream 854761 8729803 ~ 8730149 (-)
G154126 NA non-coding upstream 1112239 8987281 ~ 9024879 (-)
G153733 auts2 other downstream 86466 7785554 ~ 7788321 (-)
AMCG00005685 NA other downstream 728980 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 1378216 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 1640759 6232159 ~ 6234028 (-)
G153342 NA other downstream 1791921 6081235 ~ 6082866 (-)
AMCG00005704 NA other upstream 124294 7999336 ~ 8001405 (-)
G153806 NA other upstream 216706 8091748 ~ 8124685 (-)
G154142 NA other upstream 1215380 9090422 ~ 9092573 (-)
G154250 NA other upstream 1550248 9425290 ~ 9434940 (-)
AMCG00005850 NA other upstream 2420557 10295599 ~ 10352782 (-)

Expression


Co-expression Network