Gene
RNA
| Item | Value |
|---|---|
| gene id | G153747 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 7887566 ~ 7887780 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU193620 | True | 215 | lncRNA | 0.40 | 1 | 7887566 | 7887780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005690 | wbscr17,LOC106581212,LOC106612816 | coding | upstream | 76868 | 7799828 ~ 7810698 (+) |
| AMCG00005658 | NA | coding | upstream | 279652 | 7601285 ~ 7607914 (+) |
| AMCG00005657 | NA | coding | upstream | 336312 | 7549718 ~ 7551254 (+) |
| AMCG00005656 | auts2 | coding | upstream | 387878 | 7494110 ~ 7499688 (+) |
| AMCG00005699 | NA | coding | upstream | 475980 | 7400104 ~ 7411586 (+) |
| AMCG00005710 | sbds,LOC106581067 | coding | downstream | 62726 | 7950506 ~ 7953214 (+) |
| AMCG00005714 | NA | coding | downstream | 77279 | 7965059 ~ 7966067 (+) |
| AMCG00005713 | nips2,LOC106602830,LOC106581053,LOC105028784 | coding | downstream | 79671 | 7967451 ~ 7975239 (+) |
| AMCG00005711 | cct6a | coding | downstream | 92319 | 7980099 ~ 7984901 (+) |
| AMCG00005712 | sumf2,LOC107756135,LOC107700040,LOC107669403,LOC107715344,LOC107548208,LOC107567178 | coding | downstream | 98741 | 7986521 ~ 7989375 (+) |
| G153702 | NA | non-coding | upstream | 526249 | 7360384 ~ 7361317 (+) |
| G153689 | NA | non-coding | upstream | 589054 | 7298154 ~ 7298512 (+) |
| G153687 | NA | non-coding | upstream | 590185 | 7297134 ~ 7297381 (+) |
| G153626 | NA | non-coding | upstream | 729691 | 7102205 ~ 7157875 (+) |
| G153485 | NA | non-coding | upstream | 1324088 | 6560899 ~ 6563478 (+) |
| G153816 | NA | non-coding | downstream | 363521 | 8251301 ~ 8278074 (+) |
| G153859 | NA | non-coding | downstream | 457898 | 8345678 ~ 8351749 (+) |
| G153955 | NA | non-coding | downstream | 842023 | 8729803 ~ 8730155 (+) |
| G154025 | NA | non-coding | downstream | 894209 | 8781989 ~ 8805304 (+) |
| G154030 | NA | non-coding | downstream | 906047 | 8793827 ~ 8796424 (+) |
| AMCG00005660 | LOC106603524 | other | upstream | 99695 | 7749183 ~ 7787871 (+) |
| AMCG00005694 | NA | other | upstream | 552995 | 7307058 ~ 7334571 (+) |
| G153675 | NA | other | upstream | 621595 | 7260677 ~ 7265971 (+) |
| AMCG00005663 | NA | other | upstream | 1225086 | 6608643 ~ 6662480 (+) |
| AMCG00005667 | NA | other | upstream | 1398784 | 6487718 ~ 6488782 (+) |
| G153815 | NA | other | downstream | 326124 | 8213904 ~ 8230590 (+) |
| AMCG00005720 | NA | other | downstream | 610722 | 8498502 ~ 8507097 (+) |
| AMCG00005787 | NA | other | downstream | 940798 | 8828578 ~ 8854100 (+) |
| G154251 | NA | other | downstream | 1548120 | 9435900 ~ 9438269 (+) |
| G154283 | NA | other | downstream | 1700022 | 9587802 ~ 9589798 (+) |
