Gene
RNA
| Item | Value |
|---|---|
| gene id | G154126 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 8987281 ~ 9024879 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04913 | Ovarian steroidogenesis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU194132 | True | 878 | lncRNA | 0.41 | 2 | 8987281 | 9024879 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005744 | NA | coding | downstream | 53823 | 8906411 ~ 8933458 (-) |
| AMCG00005743 | LOC106523455 | coding | downstream | 91966 | 8886096 ~ 8895315 (-) |
| AMCG00005797 | NA | coding | downstream | 163245 | 8821543 ~ 8824036 (-) |
| AMCG00005796 | prpf8,LOC106612861,LOC100380699,LOC107756948 | coding | downstream | 168174 | 8818674 ~ 8819107 (-) |
| AMCG00005793 | prpf8,LOC102787788 | coding | downstream | 168835 | 8805151 ~ 8818446 (-) |
| AMCG00005748 | NA | coding | upstream | 2250 | 9027129 ~ 9030678 (-) |
| AMCG00005747 | LOC107744803 | coding | upstream | 18252 | 9043131 ~ 9053426 (-) |
| AMCG00005776 | nsrp1 | coding | upstream | 157636 | 9182515 ~ 9192061 (-) |
| AMCG00005778 | NA | coding | upstream | 169553 | 9194432 ~ 9201293 (-) |
| AMCG00005779 | NA | coding | upstream | 179036 | 9203915 ~ 9206461 (-) |
| G154010 | NA | non-coding | downstream | 257132 | 8729803 ~ 8730149 (-) |
| G153980 | NA | non-coding | downstream | 399059 | 8574192 ~ 8588222 (-) |
| G153779 | NA | non-coding | downstream | 965641 | 7984240 ~ 8021640 (-) |
| G153778 | cct6a | non-coding | downstream | 1003350 | 7982030 ~ 7983931 (-) |
| G153742 | NA | non-coding | downstream | 1112239 | 7874787 ~ 7875042 (-) |
| G154150 | NA | non-coding | upstream | 70792 | 9095671 ~ 9108363 (-) |
| G154157 | blmh,LOC106612652 | non-coding | upstream | 103891 | 9128770 ~ 9139826 (-) |
| G154234 | git1 | non-coding | upstream | 300643 | 9325522 ~ 9330533 (-) |
| G154235 | NA | non-coding | upstream | 306464 | 9331343 ~ 9332033 (-) |
| G154237 | NA | non-coding | upstream | 318876 | 9343755 ~ 9393333 (-) |
| G153806 | NA | other | downstream | 862596 | 8091748 ~ 8124685 (-) |
| AMCG00005704 | NA | other | downstream | 985876 | 7999336 ~ 8001405 (-) |
| G153733 | auts2 | other | downstream | 1198960 | 7785554 ~ 7788321 (-) |
| AMCG00005685 | NA | other | downstream | 1841474 | 7109218 ~ 7145807 (-) |
| AMCG00005674 | NA | other | downstream | 2490710 | 6490255 ~ 6496571 (-) |
| G154142 | NA | other | upstream | 65543 | 9090422 ~ 9092573 (-) |
| G154250 | NA | other | upstream | 400411 | 9425290 ~ 9434940 (-) |
| AMCG00005850 | NA | other | upstream | 1270720 | 10295599 ~ 10352782 (-) |
| AMCG00005862 | NA | other | upstream | 1518655 | 10543534 ~ 10551355 (-) |
| AMCG00005839 | LOC103367321,LOC107729686,LOC103398303 | other | upstream | 1713665 | 10738544 ~ 10752114 (-) |
