Gene
RNA
| Item | Value |
|---|---|
| gene id | G154147 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 9100429 ~ 9108370 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04672 | Intestinal immune network for IgA production |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU194153 | True | 423 | lncRNA | 0.53 | 2 | 9100429 | 9108370 |
| TU194154 | False | 423 | lncRNA | 0.53 | 2 | 9100429 | 9108370 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005749 | ncbp3 | coding | upstream | 7866 | 9083152 ~ 9092563 (+) |
| AMCG00005745 | NA | coding | upstream | 61367 | 9035288 ~ 9039062 (+) |
| AMCG00005746 | NA | coding | upstream | 83691 | 9010184 ~ 9016738 (+) |
| AMCG00005742 | NA | coding | upstream | 196345 | 8897277 ~ 8904084 (+) |
| AMCG00005788 | NA | coding | upstream | 216628 | 8876410 ~ 8883801 (+) |
| AMCG00005751 | blmh | coding | downstream | 7101 | 9115471 ~ 9128845 (+) |
| AMCG00005752 | NA | coding | downstream | 22667 | 9131037 ~ 9139661 (+) |
| AMCG00005753 | NA | coding | downstream | 50861 | 9159231 ~ 9164216 (+) |
| AMCG00005750 | NA | coding | downstream | 56663 | 9165033 ~ 9180805 (+) |
| AMCG00005774 | ssh2 | coding | downstream | 132264 | 9240634 ~ 9251830 (+) |
| G154143 | NA | non-coding | upstream | 5759 | 9093909 ~ 9094670 (+) |
| G154091 | NA | non-coding | upstream | 28682 | 9021950 ~ 9071747 (+) |
| G154025 | NA | non-coding | upstream | 295125 | 8781989 ~ 8805304 (+) |
| G154030 | NA | non-coding | upstream | 304005 | 8793827 ~ 8796424 (+) |
| G153955 | NA | non-coding | upstream | 370274 | 8729803 ~ 8730155 (+) |
| G154175 | NA | non-coding | downstream | 83926 | 9192296 ~ 9194187 (+) |
| G154252 | NA | non-coding | downstream | 332123 | 9440493 ~ 9441381 (+) |
| G154343 | NA | non-coding | downstream | 797402 | 9905772 ~ 9944143 (+) |
| G154388 | NA | non-coding | downstream | 969937 | 10078307 ~ 10079436 (+) |
| G154447 | NA | non-coding | downstream | 1177144 | 10285514 ~ 10332094 (+) |
| AMCG00005787 | NA | other | upstream | 246329 | 8828578 ~ 8854100 (+) |
| AMCG00005720 | NA | other | upstream | 593332 | 8498502 ~ 8507097 (+) |
| G153815 | NA | other | upstream | 869839 | 8213904 ~ 8230590 (+) |
| AMCG00005660 | LOC106603524 | other | upstream | 1312558 | 7749183 ~ 7787871 (+) |
| AMCG00005694 | NA | other | upstream | 1765858 | 7307058 ~ 7334571 (+) |
| G154251 | NA | other | downstream | 327530 | 9435900 ~ 9438269 (+) |
| G154283 | NA | other | downstream | 479432 | 9587802 ~ 9589798 (+) |
| G154330 | NA | other | downstream | 773012 | 9881382 ~ 9883955 (+) |
| AMCG00005802 | NA | other | downstream | 956790 | 10065160 ~ 10089769 (+) |
| AMCG00005929 | NA | other | downstream | 1158903 | 10267273 ~ 10356244 (+) |
