G154574


Basic Information

Item Value
gene id G154574
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10575979 ~ 10576437 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU194687
CCCCTATTCTGCTCGCCCACACCTGGCCGGCcactggtgctgctgctgccccgACAGCCGTCCCGGGATCCGGAGCAAATGCGACGCGACGTGGGATCTGTCAGGAGCGACGCTCAGAAAGCGCCccagctgtgcagtgtgtgtgcatgtgtgtgtgcatgtgtgtgcatgtgtgcgtttCCTTTCGATAGCACTTGTGTTATCATGCCATTCTCACAATAGTTGTCCTGTCCTCGGCGGCTACGCACGCCTTCTGCTCAGAGCCATTAAAACAACTCGGCGACGCCTGCTCACTTGAAGAAACGCAGCGCAGGATCTGCTGTGGATCTAATCACGCAATAAATCGATCAAGCCCGAATCGGTTGTATCCCCTCGCTGTCCAACACCCCCCTCCTTGGCTGGCTGATGAATTCCCGAGCTGTCCTGCGCTCTCCGCTCTTGCGCTTTGTCAAGGTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194687 True 459 lncRNA 0.57 1 10575979 10576437

Neighbor

gene id symbol gene type direction distance location
AMCG00005857 NA coding upstream 52148 10520856 ~ 10523831 (+)
AMCG00005856 NA coding upstream 68687 10503578 ~ 10507292 (+)
AMCG00005858 NA coding upstream 73157 10502507 ~ 10502822 (+)
AMCG00005818 mpnd,LOC106591182,LOC107717566 coding upstream 89230 10480210 ~ 10486749 (+)
AMCG00005817 cactin,LOC106600017 coding upstream 139477 10431563 ~ 10436502 (+)
AMCG00005804 LOC106613805,LOC101170792,LOC103364385 coding downstream 39445 10615882 ~ 10623009 (+)
AMCG00005803 NA coding downstream 50012 10626449 ~ 10633432 (+)
AMCG00005837 NA coding downstream 120340 10696777 ~ 10697001 (+)
AMCG00005836 aes,chico,LOC103379965,LOC106574496,LOC107558286 coding downstream 124573 10701010 ~ 10712559 (+)
AMCG00005833 NA coding downstream 269099 10845536 ~ 10846858 (+)
G154505 NA non-coding upstream 49927 10523967 ~ 10526052 (+)
G154473 NA non-coding upstream 86125 10419906 ~ 10489854 (+)
G154447 NA non-coding upstream 243885 10285514 ~ 10332094 (+)
G154451 NA non-coding upstream 272482 10302957 ~ 10303497 (+)
G154388 NA non-coding upstream 496543 10078307 ~ 10079436 (+)
G154583 NA non-coding downstream 91561 10667998 ~ 10668261 (+)
G154722 NA non-coding downstream 421212 10997649 ~ 10999389 (+)
G154775 NA non-coding downstream 597958 11174395 ~ 11180237 (+)
G154815 dot1l non-coding downstream 785568 11362005 ~ 11362233 (+)
G154816 NA non-coding downstream 793987 11370424 ~ 11370912 (+)
G154499 NA other upstream 59589 10512504 ~ 10516390 (+)
G154486 NA other upstream 104348 10470543 ~ 10471631 (+)
AMCG00005821 NA other upstream 106573 10462537 ~ 10469406 (+)
AMCG00005929 NA other upstream 219735 10267273 ~ 10356244 (+)
AMCG00005835 LOC107586405 other downstream 103500 10679937 ~ 10714707 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other downstream 145315 10721752 ~ 10736626 (+)
G154636 LOC108435919,LOC108271001 other downstream 336960 10913397 ~ 10915729 (+)
AMCG00005840 LOC100304646,LOC107384145 other downstream 430361 11006798 ~ 11010354 (+)
G154756 NA other downstream 506724 11083161 ~ 11086011 (+)

Expression


Co-expression Network