G154583


Basic Information

Item Value
gene id G154583
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10667998 ~ 10668261 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU194696
GGTGGGTAAGGAGTGGTTGcgtgtttttataattattatcgcagaaactgaaaagaaaagaaaagaaaagaaagaatgaattacagaaaagaaaaagaatgacaGCACGGGTGAAAGACAAAGCAACACCACCACTACTGctgcccccacacacacagcacagcggCTGGCGCCCCACTCCACAGCCCACGCAGGGACACTCGCTCCGGCCGGCCCGGGGCTGCTGTCCTCCCCTCCTGTCGGAAGGACGTCCAATTACCCGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194696 True 264 lncRNA 0.53 1 10667998 10668261

Neighbor

gene id symbol gene type direction distance location
AMCG00005803 NA coding upstream 34566 10626449 ~ 10633432 (+)
AMCG00005804 LOC106613805,LOC101170792,LOC103364385 coding upstream 44989 10615882 ~ 10623009 (+)
AMCG00005857 NA coding upstream 144167 10520856 ~ 10523831 (+)
AMCG00005856 NA coding upstream 160706 10503578 ~ 10507292 (+)
AMCG00005858 NA coding upstream 165176 10502507 ~ 10502822 (+)
AMCG00005837 NA coding downstream 28516 10696777 ~ 10697001 (+)
AMCG00005836 aes,chico,LOC103379965,LOC106574496,LOC107558286 coding downstream 32749 10701010 ~ 10712559 (+)
AMCG00005833 NA coding downstream 177275 10845536 ~ 10846858 (+)
AMCG00005826 sirt6,LOC107667852 coding downstream 214358 10882619 ~ 10886247 (+)
AMCG00005867 eef2b,ef2,LOC106613766,LOC107552698 coding downstream 238096 10906357 ~ 10912672 (+)
G154574 NA non-coding upstream 91561 10575979 ~ 10576437 (+)
G154505 NA non-coding upstream 141946 10523967 ~ 10526052 (+)
G154473 NA non-coding upstream 178144 10419906 ~ 10489854 (+)
G154447 NA non-coding upstream 335904 10285514 ~ 10332094 (+)
G154451 NA non-coding upstream 364501 10302957 ~ 10303497 (+)
G154722 NA non-coding downstream 329388 10997649 ~ 10999389 (+)
G154775 NA non-coding downstream 506134 11174395 ~ 11180237 (+)
G154815 dot1l non-coding downstream 693744 11362005 ~ 11362233 (+)
G154816 NA non-coding downstream 702163 11370424 ~ 11370912 (+)
G154831 NA non-coding downstream 710519 11378780 ~ 11379289 (+)
G154499 NA other upstream 151608 10512504 ~ 10516390 (+)
G154486 NA other upstream 196367 10470543 ~ 10471631 (+)
AMCG00005821 NA other upstream 198592 10462537 ~ 10469406 (+)
AMCG00005929 NA other upstream 311754 10267273 ~ 10356244 (+)
AMCG00005835 LOC107586405 other downstream 11676 10679937 ~ 10714707 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other downstream 53491 10721752 ~ 10736626 (+)
G154636 LOC108435919,LOC108271001 other downstream 245136 10913397 ~ 10915729 (+)
AMCG00005840 LOC100304646,LOC107384145 other downstream 338537 11006798 ~ 11010354 (+)
G154756 NA other downstream 414900 11083161 ~ 11086011 (+)

Expression


Co-expression Network