G154831


Basic Information

Item Value
gene id G154831
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11378780 ~ 11379289 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195024
TGAAACGCATACCCTGTGGTGTTTGGGTGGAGCCGATTGGAGGGGGAGAGTTGGCGTATGCTACTCTGAGCCCCCTGAGCCTGTGCAGCAGTTTGGGAGCCTCAGTTTGGGAGTTTAATGGGCGCGCTGGTGTTCATCCACAGAGCTGAGGGTGTCTGTGTTTGGTTCCTCTGTTTTTAAGGACCTCCCACAGAAAAACCTTAGACAGAATGGAGTCACTCCACCCTCTGTTGCTGTCCTGTGTCTTGCCATGAGGCCGTGCCCGAGGGGGAGACGGGGTCTGAGCTGTAGTGCTCTGAGGGGCCGACCGTGTGTTCAGGGGGCTTCAGGTGGCTGACTGAGTTGAACTAAACCACGAGCCTTAAACTCTGTTAATTATGGACCTTAATGGGGCAGTGTAGCGAGACAGGGATCGTGTCTCCAGATTGGTGTATACGGGGGTGGGGCAGGGCAGGATTAGGCTGGTGGGCGGGTCTCCCTGATCTTTTCCCTCCCAGTTTACTTGGCTTC

Function

GO: NA

KEGG:

id description
ko04520 Adherens junction

RNA

RNA id representative length rna type GC content exon number start site end site
TU195024 True 510 lncRNA 0.56 1 11378780 11379289

Neighbor

gene id symbol gene type direction distance location
AMCG00005874 plekhj1 coding upstream 35176 11339604 ~ 11343604 (+)
AMCG00005873 NA coding upstream 47659 11324831 ~ 11331121 (+)
AMCG00005853 LOC104941186,LOC107581323,LOC107678192 coding upstream 134982 11242839 ~ 11243798 (+)
AMCG00005854 LOC108270825,LOC105011562,LOC103046807,LOC108438768,LOC102210929,LOC108247476,LOC101470054,LOC105929969 coding upstream 172191 11205387 ~ 11206589 (+)
AMCG00005816 LOC106613776,LOC100708007,LOC103354199,LOC102796955 coding upstream 206706 11171014 ~ 11172074 (+)
AMCG00005906 clg08h19orf60,cssa23h19orf60,LOC108439285,LOC107729673,LOC107676986,LOC103025814,LOC107593355 coding downstream 78209 11457498 ~ 11460743 (+)
AMCG00005908 NA coding downstream 98406 11477695 ~ 11486383 (+)
AMCG00005865 NA coding downstream 115852 11495141 ~ 11507437 (+)
AMCG00005866 NA coding downstream 179160 11558449 ~ 11562627 (+)
AMCG00005885 NA coding downstream 303520 11682809 ~ 11686775 (+)
G154816 NA non-coding upstream 7868 11370424 ~ 11370912 (+)
G154815 dot1l non-coding upstream 16547 11362005 ~ 11362233 (+)
G154775 NA non-coding upstream 198543 11174395 ~ 11180237 (+)
G154722 NA non-coding upstream 379391 10997649 ~ 10999389 (+)
G154583 NA non-coding upstream 710519 10667998 ~ 10668261 (+)
G154847 NA non-coding downstream 36776 11416065 ~ 11416329 (+)
G154863 NA non-coding downstream 70191 11449480 ~ 11465625 (+)
G154879 NA non-coding downstream 107203 11486492 ~ 11488514 (+)
G154908 NA non-coding downstream 234381 11613670 ~ 11614369 (+)
G154915 NA non-coding downstream 252802 11632091 ~ 11638019 (+)
G154798 NA other upstream 17010 11319964 ~ 11361770 (+)
G154756 NA other upstream 292769 11083161 ~ 11086011 (+)
AMCG00005840 LOC100304646,LOC107384145 other upstream 368426 11006798 ~ 11010354 (+)
G154636 LOC108435919,LOC108271001 other upstream 463051 10913397 ~ 10915729 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other upstream 642154 10721752 ~ 10736626 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other downstream 27017 11406306 ~ 11409672 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other downstream 222613 11601902 ~ 11610151 (+)
AMCG00005895 NA other downstream 524063 11903352 ~ 11906087 (+)
AMCG00005987 NA other downstream 1312527 12691816 ~ 12709543 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other downstream 1332489 12711778 ~ 12714571 (+)

Expression


Co-expression Network