G155017


Basic Information

Item Value
gene id G155017
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11970824 ~ 12207954 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195263
CTCGTGTATTAAATCACACGGCGGCACTATAGCGCCGCCGTGTGATTTAATACACGAGGCAATTCCTGCTGCAGGAAGAGCCACTGTGTTTCTCTGACAGCTCAGTCCTGGGGGGTGGGATCCTGCATGTTTGTGAAGCCCCTTCACTTGAGATCTGGGTCACAGTATCAGCGCTGGTTGAATCGAGCCACTGGTAACTAGCTGTGCCACGCAGTCAGAAGCTCAGGTGTAACTAGAGCCTGAAAACCACTGCTGCCCCCCAGGACCAGAAATACGCCCTTCCAATAAACTGGAAATCTGCAACTGCTTTTatcattgattgatttttggtttgttttaaaagctgaaaGTGATTAAACAGGTCATGCAAAGCACACGATTATTCAAAGAAGGATCCACTCATTATTTTCCAGGACCCACCCTGAGAGCAGGTGTGGAAAGCAAAGCTACTGCTGCAGGACGCTGTCAATCCACTGGGTGTAGCGGGAGACCACCGTGTAGATGCCCGGCTTCTTGGGCTTGCCACACTTCTTGCTGCCGTTGGAGGTGATGCCCACCACCACCCCGCTGTGAATGAGGGGACCTCCGGAGTCGCcctggaacacaaacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195263 True 612 lncRNA 0.51 2 11970824 12207954

Neighbor

gene id symbol gene type direction distance location
AMCG00005898 NA coding upstream 32438 11935849 ~ 11938386 (+)
AMCG00005896 NA coding upstream 35617 11932184 ~ 11935207 (+)
AMCG00005883 celf5,LOC106956403 coding upstream 146187 11802432 ~ 11824637 (+)
AMCG00005864 NA coding upstream 279232 11690821 ~ 11691592 (+)
AMCG00005885 NA coding upstream 284049 11682809 ~ 11686775 (+)
AMCG00005955 LOC107733348 coding downstream 5675 12213629 ~ 12220522 (+)
AMCG00005954 NA coding downstream 17908 12225862 ~ 12235823 (+)
AMCG00005957 cope,LOC106613672 coding downstream 43078 12251032 ~ 12255803 (+)
AMCG00005956 LOC107718480 coding downstream 48651 12256605 ~ 12269763 (+)
AMCG00005915 use1 coding downstream 230334 12438288 ~ 12443887 (+)
G154979 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700 non-coding upstream 58724 11906641 ~ 11912100 (+)
G154917 NA non-coding upstream 330898 11639686 ~ 11639926 (+)
G154916 NA non-coding upstream 332050 11638324 ~ 11638774 (+)
G154915 NA non-coding upstream 332805 11632091 ~ 11638019 (+)
G154908 NA non-coding upstream 356455 11613670 ~ 11614369 (+)
G155182 NA non-coding downstream 239526 12447480 ~ 12447684 (+)
G155207 NA non-coding downstream 337268 12545222 ~ 12585408 (+)
G155206 NA non-coding downstream 345471 12553425 ~ 12631371 (+)
G155304 NA non-coding downstream 683132 12891086 ~ 12891396 (+)
G155310 NA non-coding downstream 700740 12908694 ~ 12910931 (+)
AMCG00005895 NA other upstream 64737 11903352 ~ 11906087 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other upstream 360673 11601902 ~ 11610151 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other upstream 561152 11406306 ~ 11409672 (+)
G154798 NA other upstream 609054 11319964 ~ 11361770 (+)
G154756 NA other upstream 884813 11083161 ~ 11086011 (+)
AMCG00005987 NA other downstream 483862 12691816 ~ 12709543 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other downstream 503824 12711778 ~ 12714571 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other downstream 686166 12894120 ~ 12895452 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other downstream 817810 13025764 ~ 13033408 (+)
G155637 eps15l1,LOC107592720 other downstream 1889850 14097804 ~ 14098696 (+)

Expression


Co-expression Network