G155018 (fstl3)


Basic Information

Item Value
gene id G155018
gene name fstl3
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11984663 ~ 11986924 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195266
ATCATGACAAAGAGGTTTATGTTGGGATAAAATAgcagtacaaaaatacaaaaataagttgATACGTACATTTGGAAATTCAGTCTCATGGTAAATACAGTTCTATTTACAAGCAGGTATAATATAGGTTATAGCACAACACATTACAAGAAACAGTAGATTAGAATTCATTATCCATGTCACACATGAACACAGTTAATGAAATTAGCGTCACAAATTCAAATCACATACGTTTTCTtctcaataaatattttaatttaaaggaagTCCAaattgtgttcagtgtgttttttaCATACAGATATAAAATCCTTttccattcaaaaacaaataaaatgagcagcatgtatttttaaatcagtttagaAAAAGGGGAATTCCTCCATTAAATAAGATGTTTCCAAATAACACTGGAATTTATTTAACAAGAAGggaaattaaaatcttaaatctGTAAAGAGCTGATAAGgaacatatgaaaaatatgatttctcCCCAATCTAaagattataatatatttatgtggATAGAGGACAAACAAAGATAGCAATCGGTGGGACACTGCCTGGCTGATAAAAACTCCTACGTCTTTGCGGTTTGGGTTGGAATTTGATTGCAGTTTGATCAATTCGATTGAGTGTTCGATTGAAGTGGTGGACTGCAGCTCAAGTCTTAACAGTCTTCATTAAGaactattaatacaaaatgtaaaaaacatgtAGTTTGGCACATTACCAAATACTTAATTAAGAAGTGAGAACTGTAGGAGATGAAGGTTGAGGTAGCCCCAGTGTAATGCAGAGAATCTCTCTCTATTAAGCTGTCCATGGTTTGAGACAGTATGGCAAAATTGTATGTATCATTAAAAACTCAAATTCTACTTTCTAAATATTAGAATATTAATAAACTCAAGAAGGGTCACACTGTTTTTTAATCCTAAATCATTGTGGTTCCCCGTTTTCTGAACACTAACTGTCCGTATCAtcaaattgaaattaaacaattaataattgACCTGATTggtatatttctgttttactttaattattaatgtaaaacattttgatatacatttttgagAGCTTTATGaacacagcacagaaaaaaacaaaatcaaaaacatgagaaaaatgtaataaatatagctCTAAAAAAAGAGGGTGTGATTCGtatacatgaaaaacaacaatatacaaatacaaatggtttttcataatttttgcTCCAATAAATATCCGTGgggttttatttacaatattcaCATTTCAAGCCACCTTCGTCCCTCTTCTGCTCGGCTGGTCCCTAATATAGGCCTCCGTTTCTTGGGAAATCAAAACTATCAATGTTGGAAATGAAAGATGGCAGCAATTCTTTTCTGATAACATCTCACCCTGAAAAAAATGTAGGTTCTTCAATCTGGTACTTATAATTATCTTGGTATCTTATTCTTAACTGGGTTGTAAAGTGACCTGTAATTGGATCtcccttttttaaaacaagtgcgGTTATTTATCTATTACTTGGAAGAATCAGATCCTCTACTCTCATTATTGTGCAACAGATaggtgggtgtgtgtctgtctgtctgacttcGTCCATCTGCTTTCCCTTTGTTCCTGGTCTTCAGAAAAATCTCAGTCATCTGACCTAAGTCAAGGACTCGCCTCTCTGCTGGGGTAGCGCTTCCTACACCGAGTTTTCCTCGCTCTCATCTCGGCCCAGGGCATGTTTCGGTACATCTGGTCTTACGTGTGCAGTAGCCATAGTGGCGGATGCCGATGGATCTGCCCAGGAAGCAGGTTGCCCGTCGCAGGTGGCAGGCGCTGGGGTAGGTGATGTTGTCGTTGCCGCAGATGGGCTGCTCAGATGCCATGGGCGGGGGGCAGGGGGCCGTGCGACACATGACGCAATGGGCGCTGTCGGTCTGGTCTGTCACACAGGTATGAGTGCCCGGGCACACCACGTTGGAGCAGGA

Function

symbol description
fstl3 Predicted to enable activin binding activity. Predicted to be involved in cell differentiation; negative regulation of activin receptor signaling pathway; and regulation of BMP signaling pathway. Predicted to be active in extracellular space. Orthologous to human FSTL3 (follistatin like 3).

NR:

description
PREDICTED: follistatin-related protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195266 True 1975 lncRNA 0.37 2 11984663 11986924

Neighbor

gene id symbol gene type direction distance location
AMCG00005897 NA coding upstream 12590 11952361 ~ 11972073 (+)
AMCG00005898 NA coding upstream 46277 11935849 ~ 11938386 (+)
AMCG00005896 NA coding upstream 49456 11932184 ~ 11935207 (+)
AMCG00005883 celf5,LOC106956403 coding upstream 160026 11802432 ~ 11824637 (+)
AMCG00005864 NA coding upstream 293071 11690821 ~ 11691592 (+)
AMCG00005903 rnf126,LOC102780338,LOC107569633 coding downstream 9900 11996824 ~ 12003499 (+)
AMCG00005904 NA coding downstream 26604 12013528 ~ 12017391 (+)
AMCG00005902 LOC106526626,LOC106613751,LOC103357601,LOC101487604,LOC102789567 coding downstream 40757 12027681 ~ 12068052 (+)
AMCG00005894 NA coding downstream 160568 12147492 ~ 12165856 (+)
AMCG00005892 fgf22,LOC106584266 coding downstream 183156 12170080 ~ 12171314 (+)
G154979 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700 non-coding upstream 72563 11906641 ~ 11912100 (+)
G154917 NA non-coding upstream 344737 11639686 ~ 11639926 (+)
G154916 NA non-coding upstream 345889 11638324 ~ 11638774 (+)
G154915 NA non-coding upstream 346644 11632091 ~ 11638019 (+)
G154908 NA non-coding upstream 370294 11613670 ~ 11614369 (+)
G155053 NA non-coding downstream 214812 12201736 ~ 12203472 (+)
G155182 NA non-coding downstream 460556 12447480 ~ 12447684 (+)
G155207 NA non-coding downstream 558298 12545222 ~ 12585408 (+)
G155206 NA non-coding downstream 566501 12553425 ~ 12631371 (+)
G155304 NA non-coding downstream 904162 12891086 ~ 12891396 (+)
AMCG00005895 NA other upstream 78576 11903352 ~ 11906087 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other upstream 374512 11601902 ~ 11610151 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other upstream 574991 11406306 ~ 11409672 (+)
G154798 NA other upstream 622893 11319964 ~ 11361770 (+)
G154756 NA other upstream 898652 11083161 ~ 11086011 (+)
AMCG00005987 NA other downstream 704892 12691816 ~ 12709543 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other downstream 724854 12711778 ~ 12714571 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other downstream 907196 12894120 ~ 12895452 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other downstream 1038840 13025764 ~ 13033408 (+)
G155637 eps15l1,LOC107592720 other downstream 2110880 14097804 ~ 14098696 (+)

Expression


Co-expression Network