G155053


Basic Information

Item Value
gene id G155053
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12201736 ~ 12203472 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195305
TTTACATTGAACTAAACTACAGTTGAACAGAGAATGTCttgttgatttgtttggttgtttaaaAACAAGCAGTGTGTTTCCACTTTGGTTGATGTTTTAATTGACAGGCTATACAGTCCTAGatattgtgtgagtgtgaaccAAATTATAACCGTCTCTCCTTCTTTAGGACCACGTAGGTTTTACGGTGGAACTCAGTGAAGTGGGGCTCAGTGGCAACACAGCAACTGGGGTTAATTTATATGGAAGCTTTATTATGAGCAAAAAGAAACTCAAACACATGTTATCAAATTCCAGCAAGCAGAAAACACTGAAGAACAGATAGAGTGATTGTGATACAAATGTATGCAGAATGCTTTTGCAGCAGaattgtatatactgtactgcataGTAATGCAACAGGAGGTCAGTCACTGTTCAGAATTTCATTGATCCAAGGGATGTATCTGCTTATCTTGGTAAAGACACCAGGCTTCTCATTACACAGAAGGCTGCCCTTGGAGACGATGCCCTGTGCCACCCCATTGCAGACCAGAGGTCCTCCGGAGTccccctgaaacacacacacatagatacacacGATCATTGGGTGTCCCTGTAGAAACAATGCATAGGATACAAACTCTTGACACAAATGATGGCAGAATCAGAAATTCTACAGTAATGAGCTGAGAGCGTTCCTGACGTCTGATCTCAGAGTTCTTAGGCTTTGTTGGTCTTTCTCAAAGGCACGACATTTTCTCAAGCtgtcaattcatttttatagaCACTGTCATGTGCTTGGGTGGCATACTCTGCAGATACACATGCATTATCAAGACTACTTTCCAGAAGGGTGCTACCACAGGACTGTTTTCTGTTCGGTTGTTTTTTGTCCAGTAGCAGAACAGGACAGCACACCATGTGTACATGATCATGGTAAATAATTGGTTCTAACAAATAATCagatattgtatattttgttaataaatataaaaaacatgttcattacAAAGCAAGTTCCATGCTTAGGATCACCGGCGCAGATATTCGTCTTTGTGTACTCTCTGCCCCACTCCTGTTTGCAGTGGGTGAAATCCCACACTGTCACGTTCACCTCCACCAGAGTATTAGAACTGCCTTTCCCACTGGGGTCCGTTGCCCCCCATCCAGCCACAGAGCACTCTGTGTTCGGTGACACACTCTTCTGTTCCAATGGCAATGGAATCACGGCCACGTTCTTATTCAGAGGaacctttttttTACCTTCAGCAGCATGATGTCATTGTGATATTCCTCATAACCACAGTGAGGGATGGCCTTCTCCACCTGTGTGATCATCTGTGCTTTCTCATTTTCCATGATGTTGTGGGCTCCAAGGATAACTGTGTAACTCCTgtgattaaagaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195305 True 1392 lncRNA 0.42 2 12201736 12203472

Neighbor

gene id symbol gene type direction distance location
AMCG00005958 NA coding upstream 11089 12178240 ~ 12190647 (+)
AMCG00005892 fgf22,LOC106584266 coding upstream 30422 12170080 ~ 12171314 (+)
AMCG00005894 NA coding upstream 35880 12147492 ~ 12165856 (+)
AMCG00005902 LOC106526626,LOC106613751,LOC103357601,LOC101487604,LOC102789567 coding upstream 133684 12027681 ~ 12068052 (+)
AMCG00005904 NA coding upstream 184345 12013528 ~ 12017391 (+)
AMCG00005955 LOC107733348 coding downstream 10157 12213629 ~ 12220522 (+)
AMCG00005954 NA coding downstream 22390 12225862 ~ 12235823 (+)
AMCG00005957 cope,LOC106613672 coding downstream 47560 12251032 ~ 12255803 (+)
AMCG00005956 LOC107718480 coding downstream 53133 12256605 ~ 12269763 (+)
AMCG00005915 use1 coding downstream 234816 12438288 ~ 12443887 (+)
G155018 fstl3 non-coding upstream 214812 11984663 ~ 11986924 (+)
G154979 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700 non-coding upstream 289636 11906641 ~ 11912100 (+)
G154917 NA non-coding upstream 561810 11639686 ~ 11639926 (+)
G154916 NA non-coding upstream 562962 11638324 ~ 11638774 (+)
G154915 NA non-coding upstream 563717 11632091 ~ 11638019 (+)
G155182 NA non-coding downstream 244008 12447480 ~ 12447684 (+)
G155207 NA non-coding downstream 341750 12545222 ~ 12585408 (+)
G155206 NA non-coding downstream 349953 12553425 ~ 12631371 (+)
G155304 NA non-coding downstream 687614 12891086 ~ 12891396 (+)
G155310 NA non-coding downstream 705222 12908694 ~ 12910931 (+)
AMCG00005895 NA other upstream 295649 11903352 ~ 11906087 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other upstream 591585 11601902 ~ 11610151 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other upstream 792064 11406306 ~ 11409672 (+)
G154798 NA other upstream 839966 11319964 ~ 11361770 (+)
G154756 NA other upstream 1115725 11083161 ~ 11086011 (+)
AMCG00005987 NA other downstream 488344 12691816 ~ 12709543 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other downstream 508306 12711778 ~ 12714571 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other downstream 690648 12894120 ~ 12895452 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other downstream 822292 13025764 ~ 13033408 (+)
G155637 eps15l1,LOC107592720 other downstream 1894332 14097804 ~ 14098696 (+)

Expression


Co-expression Network