G155059


Basic Information

Item Value
gene id G155059
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12007468 ~ 12017366 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195313
TCCACAATCTCATCGGGCTTTCGCCTCTTCTCGTAGATGAAGATAACGGTGACCAGGATGATGACCTCTGCCACAATGCCAAGGAAGGGCCACAGGGCGGCGAGGCGGCTGCGCACACGCAAGTGGATCTTGTCGCGGTTCAAGCCGATGTCGTTCTCGCCGACGCACTCGTAGTCACCCATATCGTCTTCCATGTCCAAGTTATCGATGTACAGGATGGTCTTCTCCGGGGTGCTCTTGATCTCGTACTTTCCCGCTGTTCCATTAATGGGTGTTTCTGCACCATTTTTGAACCACATCCAGGATGTTGGCAGGGGATAGCCATGGCTTACACAGGTGAGCACACCTTTGTCCTGCTCATTTCCATGCTCAGAGTGCTTGTATGCTTTAACATGAGGGGGCATTTTGACTTCAATGCTTTTGTTGGCTTCAGGGGTGATGAGATACACACAGGTATAGATCCCTCCATTTTCAGGATTAAGATTCTTTAGCTCAAGCTTCATGAAGGGATCACTCTTTTGGTCCTTGGTGTCCTTAATCTCTTTGCCGTTCTTTACCCAGTAACGACCTTTAATTTCATTTGGGGGGTTTGTCATGTTGCAGGACAGAACGGTGGAAGAGATATTGCTTGCCTCCAGAGGAAAGGTCACGATCTCAGGAGCTGCTCTGTCCTGAAAGCTAGCCGTAGTGTTTTACGAAGCGCtgtttaatctgtatttatttcgcAGCCGAAGCCAGCGGCCTGTATCTCTCCGCTCCGCCTGTAGGTCTGACTCCAGCGCCGACTGTTGTCCTCTATTTGTTCCCACGCACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195313 True 815 lncRNA 0.50 5 12007468 12017366

Neighbor

gene id symbol gene type direction distance location
AMCG00005905 NA coding downstream 13737 11984663 ~ 11993731 (-)
AMCG00005901 NA coding downstream 76618 11918788 ~ 11930850 (-)
AMCG00005899 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700,LOC104964522 coding downstream 89403 11906566 ~ 11918065 (-)
AMCG00005900 NA coding downstream 105078 11897018 ~ 11902390 (-)
AMCG00005884 rgma,LOC103371300 coding downstream 144430 11838001 ~ 11863038 (-)
AMCG00005893 polrmt,LOC102781777,LOC103149847,LOC101483880,LOC106937851 coding upstream 69677 12087043 ~ 12119953 (-)
AMCG00005960 NA coding upstream 177214 12194580 ~ 12212371 (-)
AMCG00005959 tnfaip8l1,LOC107702643,LOC107727554,LOC107733325 coding upstream 221967 12239333 ~ 12246234 (-)
AMCG00005961 ncln,LOC106573831 coding upstream 249719 12267085 ~ 12280796 (-)
AMCG00005919 NA coding upstream 307734 12325100 ~ 12326263 (-)
G155003 NA non-coding downstream 74521 11932112 ~ 11932947 (-)
G154954 NA non-coding downstream 317420 11689740 ~ 11690048 (-)
G154909 NA non-coding downstream 393085 11613674 ~ 11614383 (-)
G154906 NA non-coding downstream 393857 11569273 ~ 11613611 (-)
G154848 NA non-coding downstream 591080 11415817 ~ 11416388 (-)
G155073 NA non-coding upstream 107795 12125161 ~ 12126128 (-)
G155183 NA non-coding upstream 430154 12447520 ~ 12447719 (-)
G155235 NA non-coding upstream 588357 12605723 ~ 12611445 (-)
G155284 NA non-coding upstream 729057 12746423 ~ 12746716 (-)
G155326 NA non-coding upstream 873741 12891107 ~ 12891358 (-)
AMCG00005875 NA other downstream 630930 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 646594 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 668333 11336595 ~ 11339135 (-)
AMCG00005876 oaz1,oaz1s other downstream 682400 11320260 ~ 11325068 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 1141672 10849515 ~ 10865796 (-)
AMCG00005989 NA other upstream 651890 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 661039 12678405 ~ 12711136 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 826399 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 879188 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 902757 12920123 ~ 12949967 (-)

Expression


Co-expression Network