G155182


Basic Information

Item Value
gene id G155182
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12447480 ~ 12447684 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195472
TGTACATGTAGTGAAGTCCACATTAGTGTAGATtaagagcattttaaaaacaactgttcATCATGGTGCCACATGCATTAAGATATTTGTATTAGATTTGAATCTACAGAAGTGTCTACTGATTGCAGAGTTTATAAAGTCTTTTGTTGTCCTTTTTATATCTTGTTACTCTGGACTtttctgctctgtgattgggtaATTTTGG

Function

GO: NA

KEGG:

id description
ko00100 Steroid biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU195472 True 205 lncRNA 0.33 1 12447480 12447684

Neighbor

gene id symbol gene type direction distance location
AMCG00005915 use1 coding upstream 3593 12438288 ~ 12443887 (+)
AMCG00005956 LOC107718480 coding upstream 177717 12256605 ~ 12269763 (+)
AMCG00005957 cope,LOC106613672 coding upstream 191677 12251032 ~ 12255803 (+)
AMCG00005954 NA coding upstream 211657 12225862 ~ 12235823 (+)
AMCG00005955 LOC107733348 coding upstream 226958 12213629 ~ 12220522 (+)
AMCG00005921 LOC108415638,LOC106916182 coding downstream 43957 12491641 ~ 12493573 (+)
AMCG00005920 NA coding downstream 74187 12521871 ~ 12544857 (+)
AMCG00005922 NA coding downstream 114013 12561697 ~ 12605848 (+)
AMCG00005985 lsm7,LOC107593053 coding downstream 288443 12736127 ~ 12738524 (+)
AMCG00005986 NA coding downstream 291787 12739471 ~ 12741891 (+)
G155017 NA non-coding upstream 239526 11970824 ~ 12207954 (+)
G155053 NA non-coding upstream 244008 12201736 ~ 12203472 (+)
G155018 fstl3 non-coding upstream 460556 11984663 ~ 11986924 (+)
G154979 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700 non-coding upstream 535380 11906641 ~ 11912100 (+)
G154917 NA non-coding upstream 807554 11639686 ~ 11639926 (+)
G155207 NA non-coding downstream 97538 12545222 ~ 12585408 (+)
G155206 NA non-coding downstream 105741 12553425 ~ 12631371 (+)
G155304 NA non-coding downstream 443402 12891086 ~ 12891396 (+)
G155310 NA non-coding downstream 461010 12908694 ~ 12910931 (+)
G155297 NA non-coding downstream 472416 12920100 ~ 12937119 (+)
AMCG00005895 NA other upstream 541393 11903352 ~ 11906087 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other upstream 837329 11601902 ~ 11610151 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other upstream 1037808 11406306 ~ 11409672 (+)
G154798 NA other upstream 1085710 11319964 ~ 11361770 (+)
G154756 NA other upstream 1361469 11083161 ~ 11086011 (+)
AMCG00005987 NA other downstream 244132 12691816 ~ 12709543 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other downstream 264094 12711778 ~ 12714571 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other downstream 446436 12894120 ~ 12895452 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other downstream 578080 13025764 ~ 13033408 (+)
G155637 eps15l1,LOC107592720 other downstream 1650120 14097804 ~ 14098696 (+)

Expression


Co-expression Network