G155183


Basic Information

Item Value
gene id G155183
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12447520 ~ 12447719 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195473
GCTTTATTCAATTAACACATAATTCTCAAAACCCCCCAAAATtacccaatcacagagcagaaaAGTCCAGAGTAACAAGATATAAAAAGGACAACAAAAGACTTTATAAACTCTGCAATCAGTAGACACTTCTGTAGATTCAAATCTAATACAAATATCTTAATGCATGTGGCACCATGATgaacagttgtttttaaaat

Function

GO:

id name namespace
GO:0006091 generation of precursor metabolites and energy biological_process
GO:0006099 tricarboxylic acid cycle biological_process
GO:0006101 citrate metabolic process biological_process
GO:0009060 aerobic respiration biological_process
GO:0015980 energy derivation by oxidation of organic compounds biological_process
GO:0045333 cellular respiration biological_process
GO:0005739 mitochondrion cellular_component

KEGG:

id description
ko00020 Citrate cycle (TCA cycle)
ko00620 Pyruvate metabolism
ko00190 Oxidative phosphorylation

RNA

RNA id representative length rna type GC content exon number start site end site
TU195473 True 200 lncRNA 0.32 1 12447520 12447719

Neighbor

gene id symbol gene type direction distance location
AMCG00005916 NA coding downstream 37327 12365732 ~ 12410193 (-)
AMCG00005917 hiat1a,mfsd14a,LOC108413745,LOC107738165,LOC107659405,LOC102785602 coding downstream 84644 12349245 ~ 12362876 (-)
AMCG00005918 NA coding downstream 107022 12335317 ~ 12340498 (-)
AMCG00005919 NA coding downstream 121257 12325100 ~ 12326263 (-)
AMCG00005961 ncln,LOC106573831 coding downstream 166724 12267085 ~ 12280796 (-)
AMCG00005923 LOC103464111,LOC103138520,LOC102237431,LOC107100952,LOC103373679,LOC105900972,LOC100702697 coding upstream 180997 12628716 ~ 12642191 (-)
AMCG00005988 NA coding upstream 214633 12662352 ~ 12665106 (-)
AMCG00005991 NA coding upstream 269859 12717578 ~ 12722749 (-)
AMCG00005990 sppl2b,sppl2 coding upstream 279128 12726847 ~ 12735907 (-)
AMCG00006064 NA coding upstream 299210 12746929 ~ 12759443 (-)
G155073 NA non-coding downstream 321392 12125161 ~ 12126128 (-)
G155058 NA non-coding downstream 423848 12003140 ~ 12023672 (-)
G155059 NA non-coding downstream 430154 12007468 ~ 12017366 (-)
G155003 NA non-coding downstream 514573 11932112 ~ 11932947 (-)
G154954 NA non-coding downstream 757472 11689740 ~ 11690048 (-)
G155235 NA non-coding upstream 158004 12605723 ~ 12611445 (-)
G155284 NA non-coding upstream 298704 12746423 ~ 12746716 (-)
G155326 NA non-coding upstream 443388 12891107 ~ 12891358 (-)
G155331 NA non-coding upstream 460975 12908694 ~ 12910923 (-)
G155390 gpx4,gpx4b,gpx4a,LOC107723219 non-coding upstream 580485 13028204 ~ 13033408 (-)
AMCG00005875 NA other downstream 1070982 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 1086646 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 1108385 11336595 ~ 11339135 (-)
AMCG00005876 oaz1,oaz1s other downstream 1122452 11320260 ~ 11325068 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 1581724 10849515 ~ 10865796 (-)
AMCG00005989 NA other upstream 221537 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 230686 12678405 ~ 12711136 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 396046 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 448835 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 472404 12920123 ~ 12949967 (-)

Expression


Co-expression Network