G155284


Basic Information

Item Value
gene id G155284
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12746423 ~ 12746716 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195602
agtgcatctcctcctcatggactgcaccagattgaCCAGTTCTTGCTgagagatgttaccccactcttccaccaagggacttgcaagttcccagatatttctggggggaatgaccctagccctcaccctccgatccaacaggtcccagacgtgctcaatgggataaagatccgggctcttcgctggccatggcagaacactgatattcctgtcttgcaggaaatcacgtccagcgaaggtgggtttgtgcccagaggcgacgttgttgccggtgatgtctggtaaggacctgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195602 True 294 lncRNA 0.55 1 12746423 12746716

Neighbor

gene id symbol gene type direction distance location
AMCG00005990 sppl2b,sppl2 coding downstream 10516 12726847 ~ 12735907 (-)
AMCG00005991 NA coding downstream 23674 12717578 ~ 12722749 (-)
AMCG00005988 NA coding downstream 81317 12662352 ~ 12665106 (-)
AMCG00005923 LOC103464111,LOC103138520,LOC102237431,LOC107100952,LOC103373679,LOC105900972,LOC100702697 coding downstream 104232 12628716 ~ 12642191 (-)
AMCG00005916 NA coding downstream 336230 12365732 ~ 12410193 (-)
AMCG00006064 NA coding upstream 213 12746929 ~ 12759443 (-)
AMCG00005937 timm44,LOC108441293,LOC107660209,LOC107561596,LOC106954366 coding upstream 126195 12872911 ~ 12880597 (-)
AMCG00005938 hnrnpm,LOC105900966 coding upstream 135069 12881785 ~ 12890475 (-)
AMCG00005967 polr2e,LOC107599482,LOC107669821 coding upstream 275645 13022361 ~ 13025617 (-)
AMCG00005948 NA coding upstream 422361 13169077 ~ 13171020 (-)
G155235 NA non-coding downstream 134978 12605723 ~ 12611445 (-)
G155183 NA non-coding downstream 298704 12447520 ~ 12447719 (-)
G155073 NA non-coding downstream 620295 12125161 ~ 12126128 (-)
G155058 NA non-coding downstream 722751 12003140 ~ 12023672 (-)
G155059 NA non-coding downstream 729057 12007468 ~ 12017366 (-)
G155326 NA non-coding upstream 144391 12891107 ~ 12891358 (-)
G155331 NA non-coding upstream 161978 12908694 ~ 12910923 (-)
G155390 gpx4,gpx4b,gpx4a,LOC107723219 non-coding upstream 281488 13028204 ~ 13033408 (-)
G155391 NA non-coding upstream 332769 13079485 ~ 13107493 (-)
G155400 NA non-coding upstream 361096 13107812 ~ 13108067 (-)
AMCG00005992 NA other downstream 35287 12678405 ~ 12711136 (-)
AMCG00005989 NA other downstream 70429 12669256 ~ 12675994 (-)
AMCG00005875 NA other downstream 1369885 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 1385549 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 1407288 11336595 ~ 11339135 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 97049 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 149838 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 173407 12920123 ~ 12949967 (-)
AMCG00005966 sbno2,LOC106573581 other upstream 289708 13036424 ~ 13051719 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other upstream 376841 13123557 ~ 13156318 (-)

Expression


Co-expression Network