G155391


Basic Information

Item Value
gene id G155391
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 13079485 ~ 13107493 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195743
aaattcaaaacaacGTTTCCCCTGCAGGGTAGTGGTTAATGGACTGTAATTTTCTCAAGGGCCGGCGAATGCAGAAAAGCCCTTTCACACAAATCTATCACTGGGTCACAGGAGCGAGGGATTGGACAGGTCAGGAGTTACATTCACACAGAACATGCAAAACTTCAAATGAATCCGTAAACAGTTTCTGTataaaagaaacataagacacaGATAACAGAGAAAAAATGTGCTGGCGATCCGTGATCCTTGCTGACATCCAGTTTGCACAGCcctgtcttttttgtgtgtgtctccatTCTGCGCTCAGCCAGCCTGCTGTGGCATTTGGTTTATGAACTCTAGGAACAGTGCCACGATAACTCTGTAAGCAGGCTTCGAGATTGCCTGTGCCGTATTCATTCTGTGATGAGAAGCTTGGATTGGCTCTGCTGCCCTGATTAATGCCAGTCTGTGTCCCGAGGTGATGTTGTTATAGTAATCTCAGTTCCACAGTCCAGATTCTTAGGCGTGTTGCATCAGTGCCGTTTCAAAGTCCAGAGGGTCGCTGCAGTCAGATTGTGAAAGTGAATTCATCTCGGCTGGGGAAGGGGGAGGGTTAGTATAGTTGCAGCGATTCTAGTTCCAGCAGCAATTCTAGTTCCTGTAGTCTCGATCCAGAGGGACGTCCCAAGTCTACAGTCACTTGCAGTCGCCCGGGTCAGTGCAGGAGGCTTCAGTTGGGTCTCGGCACAGCCTAGCACAGTGGGGGTGTGAATCTGCATGACAGTGTCAGTGGGTGGCCGTGGGCGGGCGGGGGGGAGAagagagagagagagagagagagagagagagagagagagagagagagagagg

Function

NR:

description
PREDICTED: intermediate filament protein ON3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195743 True 855 lncRNA 0.50 2 13079485 13107493

Neighbor

gene id symbol gene type direction distance location
AMCG00005967 polr2e,LOC107599482,LOC107669821 coding downstream 53868 13022361 ~ 13025617 (-)
AMCG00005938 hnrnpm,LOC105900966 coding downstream 189010 12881785 ~ 12890475 (-)
AMCG00005937 timm44,LOC108441293,LOC107660209,LOC107561596,LOC106954366 coding downstream 198888 12872911 ~ 12880597 (-)
AMCG00006064 NA coding downstream 320042 12746929 ~ 12759443 (-)
AMCG00005990 sppl2b,sppl2 coding downstream 343578 12726847 ~ 12735907 (-)
AMCG00005948 NA coding upstream 61584 13169077 ~ 13171020 (-)
AMCG00005947 NA coding upstream 65393 13172886 ~ 13181536 (-)
AMCG00005943 NA coding upstream 132989 13240482 ~ 13244787 (-)
AMCG00005944 NA coding upstream 140261 13247754 ~ 13250688 (-)
AMCG00005945 tmem161a coding upstream 171810 13279303 ~ 13284728 (-)
G155390 gpx4,gpx4b,gpx4a,LOC107723219 non-coding downstream 46077 13028204 ~ 13033408 (-)
G155331 NA non-coding downstream 168562 12908694 ~ 12910923 (-)
G155326 NA non-coding downstream 188127 12891107 ~ 12891358 (-)
G155284 NA non-coding downstream 332769 12746423 ~ 12746716 (-)
G155235 NA non-coding downstream 468040 12605723 ~ 12611445 (-)
G155400 NA non-coding upstream 319 13107812 ~ 13108067 (-)
G155426 NA non-coding upstream 144629 13252122 ~ 13252489 (-)
G155429 NA non-coding upstream 159470 13266963 ~ 13267162 (-)
G155431 NA non-coding upstream 166147 13273640 ~ 13274693 (-)
G155502 NA non-coding upstream 356962 13464455 ~ 13465588 (-)
AMCG00005966 sbno2,LOC106573581 other downstream 27766 13036424 ~ 13051719 (-)
AMCG00005936 march2 other downstream 108079 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other downstream 129518 12920123 ~ 12949967 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other downstream 224682 12843765 ~ 12854803 (-)
AMCG00005992 NA other downstream 368349 12678405 ~ 12711136 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other upstream 16064 13123557 ~ 13156318 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other upstream 460974 13568467 ~ 13583351 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other upstream 556571 13664064 ~ 13698534 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other upstream 1051638 14159131 ~ 14171607 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other upstream 1229398 14336891 ~ 14341603 (-)

Expression


Co-expression Network