G155521


Basic Information

Item Value
gene id G155521
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 13675209 ~ 13677337 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195907
CTTTCTGTACCCTTTTTTTTGGCAcggatgaaagaaagaaagaaagaaagaaaggaagaagaaatgtctccttttttattttctaccaGCTTTTCTGTGAGCTAAAACAGAGCCACCcgttttaaataattcatagcgatttttctttcttaaccTAGCCCcgcctccacacacacacacacacacacacacacacacacacacactcgcacacataCACTCGCTCTTTCTCCTACCCCAGAACCCCAGTCAATGGATCGTCCCACTGTTTCCGCTGCAGTCATCCAAAGCTATAACCTCATCTGTAAAACGCGTTGATTCTTTCCAATCGGGGGCCCTCAATGGCAGCCTGTGTTCCCTCCGACTTTAAATAGACAGACttgtactaaaaaaaaaaaaaaaaaaaaatagaaacggGAGCCTGGAAAGaatgtacattgtattttttaaaggccgcaaggaagaggagagaaaagggggggaaaaaaggaaaagcaagcCACCACTAAGCTCCCATTCATAAAATCGGGCTGCTTGCATATGGCTGAGGACTGCCCACAGATGAATCGGTGCTTCCTCGGAGGAAAaagcatgaataaaaacattaacctTTCCACACGGCGATTGTGTGGACTGGACTGCCCGATCCTGGGACAATACTGTGGGCCTGGGCCGGGGGCTGCTCATCACGGGAGCACACTTGAGGGCAGTTGCAAGTCTTTCTGTGCGAAATGCCTGGACCCAGCTCTGCTCACACTGACGAAACCCTTTGCAGTGCTTATCACACTggcctgtgtgtgcgtgtggtgAACTGTAGCATTTCTCAGAAGAGCAGCCTAGTCAAATTTGTCTACAGCAGTAAAGTACACTGTtgtgaatatctgaattggtgGATGTGGGGGAGGTATTGCACTTTGCTACACTTTGCTCCGTGccgtttcctttttttttttggtttcagcTGACCATTGCTCCACTTGCATCCTGCCAAAGCCCGAGTTGTCTTCCCCCAATCTGGTATTTTTTGCTGTTCTCCAGAGATGCACAGTTTTTGGGGCATAACTCACCTTTCCGTT

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195907 True 1076 lncRNA 0.46 2 13675209 13677337

Neighbor

gene id symbol gene type direction distance location
AMCG00005978 LOC106573600,LOC105011525,LOC106613740 coding downstream 107728 13561072 ~ 13567481 (-)
AMCG00005976 NA coding downstream 141325 13530876 ~ 13533884 (-)
AMCG00005953 NA coding downstream 212649 13462216 ~ 13462560 (-)
AMCG00005952 NA coding downstream 278525 13393658 ~ 13396684 (-)
AMCG00005924 slc25a42,LOC108239543 coding downstream 287815 13385183 ~ 13387394 (-)
AMCG00005970 atp5d,LOC107554819,LOC106613744,LOC107719603 coding upstream 37647 13714984 ~ 13718428 (-)
AMCG00005969 NA coding upstream 74651 13751988 ~ 13761430 (-)
AMCG00005972 stk11 coding upstream 95145 13772482 ~ 13785885 (-)
AMCG00006003 sugp1,LOC107729615,LOC107563402 coding upstream 116025 13793362 ~ 13800830 (-)
AMCG00006005 nmrk2,LOC106511986,LOC103138501,LOC101469484,LOC103464095,LOC102302661 coding upstream 136855 13814192 ~ 13827586 (-)
G155503 NA non-coding downstream 191190 13466970 ~ 13484019 (-)
G155502 NA non-coding downstream 209621 13464455 ~ 13465588 (-)
G155431 NA non-coding downstream 400516 13273640 ~ 13274693 (-)
G155429 NA non-coding downstream 408047 13266963 ~ 13267162 (-)
G155426 NA non-coding downstream 422720 13252122 ~ 13252489 (-)
G155550 NA non-coding upstream 108669 13786006 ~ 13787634 (-)
G155591 NA non-coding upstream 199386 13876723 ~ 13881170 (-)
G155593 NA non-coding upstream 206254 13883591 ~ 13884628 (-)
G155652 NA non-coding upstream 411999 14089336 ~ 14092457 (-)
G155655 NA non-coding upstream 488842 14166179 ~ 14166404 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 91858 13568467 ~ 13583351 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 518891 13123557 ~ 13156318 (-)
AMCG00005966 sbno2,LOC106573581 other downstream 623490 13036424 ~ 13051719 (-)
AMCG00005936 march2 other downstream 703803 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other downstream 725242 12920123 ~ 12949967 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other upstream 481794 14159131 ~ 14171607 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other upstream 659554 14336891 ~ 14341603 (-)
G155770 LOC103376870 other upstream 831896 14509233 ~ 14509614 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 1002460 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 1105169 14782506 ~ 14784280 (-)

Expression


Co-expression Network