G155717


Basic Information

Item Value
gene id G155717
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14369761 ~ 14370182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196154
ACAGGATTGAATTACACAGGGCCGCCAGTCTCTCATGAAGTAATGCCAAATAAACCCATGTTTGCTGGACTGCGGGGGTTTTAGAATGGCCTACAAAGCACATGCAGTTTCCAAGCCGTTCGCCTCCTTTAGCATGGCTAAGGTCTGACAAATGGTATTCCTGTCCTTTCatgtagttatttaatttttttttaatgctggaGAGAATATTGAAATCAGTCGGGACTTTAACACTTCTTCGAATGTGTAGCAAATTCTCTGCAAGCCCAGTATGTTATATGAATTTTGGGCAGCAGCTATTTCTTCAGTCTGCCAATTCTGAATAGGATGGCTTAGgcaaatatttacaaaagcaaacatgACCCAAACACTTTCCCATAATGGCGGAAACTCCATCTGTGTTTGCTTCCCCAATACATGCG

Function

GO: NA

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03030 DNA replication
ko03440 Homologous recombination

RNA

RNA id representative length rna type GC content exon number start site end site
TU196154 True 422 lncRNA 0.42 1 14369761 14370182

Neighbor

gene id symbol gene type direction distance location
AMCG00006014 NA coding downstream 97752 14264388 ~ 14272009 (-)
AMCG00006012 NA coding downstream 113023 14249791 ~ 14256738 (-)
AMCG00005996 LOC106613681 coding downstream 170847 14187248 ~ 14198914 (-)
AMCG00005998 crt,calr3,LOC102296215,LOC106573818,LOC100704618 coding downstream 190641 14173845 ~ 14179120 (-)
AMCG00005999 NA coding downstream 233150 14092900 ~ 14136611 (-)
AMCG00006015 cib3,LOC107687907 coding upstream 227 14370409 ~ 14374943 (-)
AMCG00006028 NA coding upstream 13488 14383670 ~ 14391108 (-)
AMCG00006029 NA coding upstream 23272 14393454 ~ 14401173 (-)
AMCG00006027 NA coding upstream 71728 14441910 ~ 14445493 (-)
AMCG00006026 NA coding upstream 82836 14453018 ~ 14458341 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 46647 14318979 ~ 14323114 (-)
G155701 NA non-coding downstream 64064 14300475 ~ 14305697 (-)
G155655 NA non-coding downstream 203357 14166179 ~ 14166404 (-)
G155652 NA non-coding downstream 277304 14089336 ~ 14092457 (-)
G155593 NA non-coding downstream 485133 13883591 ~ 13884628 (-)
G155754 NA non-coding upstream 52322 14422504 ~ 14424746 (-)
G155768 NA non-coding upstream 119108 14489290 ~ 14491929 (-)
G155783 NA non-coding upstream 199380 14569562 ~ 14569836 (-)
G155899 NA non-coding upstream 610202 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 730127 15100309 ~ 15105533 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 28158 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 198154 14159131 ~ 14171607 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 671227 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 786410 13568467 ~ 13583351 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 1213443 13123557 ~ 13156318 (-)
G155770 LOC103376870 other upstream 139051 14509233 ~ 14509614 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 309615 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 412324 14782506 ~ 14784280 (-)
AMCG00006102 slc5a5 other upstream 628318 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 1063250 15433432 ~ 15491642 (-)

Expression


Co-expression Network