G155832


Basic Information

Item Value
gene id G155832
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14760397 ~ 14761728 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196295
CTCCCCTTTTCACCCCTGCTCCCCTCCACactcagttttttgtttttgttttgatttctcaatTTCCCTGTTaataaagggaaataaaaaaactggTCCAATTGGATAAATCAAGAGactgtatttctgcagtttGATTCAATTTGCATCAATCTTGTACTTGATCGCAGCCTGGGGGACTGTAGAAACTGTCGTTCTGGAATAAATCAAGAGACAGCATTTGTTCTCCAGGCTCTAGTGCTGTCCTACAGGAGTTCTGCCGTTTTAAGGAACAAGATAGTGTACAGTTTGACCGTTTGCACCTAGTCGCAAGGGCATCGCTGTAGTCTATTACGCTTCGCCGTATCCACACTCCATGAACTAGAGCTACACTAGACagactgcttttatttaatgatcTCTGGATCTGATCTATTAAGACTTGGGGAGCAGGAGCAGACTGTTGCAATAAACCGTGTGAGTGTGCTCAAGCGCAACTGATTTTTGGGTGAATTTCCTTTGTGGGGGTGACTTAGCCTGGCATCTGTGCACATGACTGCGAAGGTTTAGGCTTGGGTTGGGTGGACCCTGTTCGTTCTTTCTTTGCAAAAGGGGCCATGAGGGAGTTTGGTGTCCCCCATATCCACATGGTGTTGAACTGCATTGTTTCAGACTGGAGTTGGGGAAGAACagctttttttatattgattaatgGGGAATGGTAAGTGTGAAGGAGTGTTAGAGGTCAGTCTGGTGAGAGCTCTAGGGACGTCTTTATTACTATTAGCTTGGAGTGAAGTTTTATAGGATCTGCTTGAAGACACCTATAAATCCTGAAGGAGTTGAGCTCTCCTGCACCAGAGATGGACCACACTCTTCTAATGAGATACTGGTTGGTTACAATGGTGGACTAGTCTCAGtatgtgaaatgtgtgtgtctAAGATAAGTGGTTCTTGACTCTGAAGCCTCCAACAGGGCTGCTTCTGTGTTAGAAGGAATCAGAGCTTTCAGTCACGGAAAAGGCTGTTGGATTGACAGTATCTGGTGAAAAGAATTGCTCTGTCATTcggagaggagagggggtggTGAGAATTGAAGGATTGGGGACGGGGTGTCCGGTGTAAAATTGACATTTCTGAAGAGTTGTTTCTCAAAGTGTTTCCCTTTCTTCACGGAGATTCACCAACCTGCAGGGATGTCCTGCTCTTCCAATGTACCGCTGTGCAAGAGACAACCTAACGGGGGTTCTTttaaagagaagaagaagaaaaaaataaagaaaactacaaaaaaaagaaaatgggattatttatttcttttaatttattttgtcatatttttgtaaGATCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196295 True 1332 lncRNA 0.43 1 14760397 14761728

Neighbor

gene id symbol gene type direction distance location
AMCG00006055 ano8,LOC103359425 coding upstream 4187 14742197 ~ 14756210 (+)
AMCG00006053 NA coding upstream 53273 14700791 ~ 14707124 (+)
AMCG00006056 NA coding upstream 65809 14686100 ~ 14694588 (+)
AMCG00006054 lonp1,LOC107744642,LOC107548847,LOC107678106,LOC107679084 coding upstream 79212 14671161 ~ 14681185 (+)
AMCG00006016 NA coding upstream 218512 14523381 ~ 14541885 (+)
AMCG00006042 NA coding downstream 34884 14796612 ~ 14798855 (+)
AMCG00006041 NA coding downstream 57940 14819668 ~ 14827527 (+)
AMCG00006040 nr2f6,LOC108238456,LOC103359430,LOC101171737 coding downstream 76961 14838689 ~ 14848138 (+)
AMCG00006031 NA coding downstream 229166 14990894 ~ 14991358 (+)
AMCG00006030 NA coding downstream 257058 15018786 ~ 15041927 (+)
G155790 rpl36,LOC107678109,LOC107741803,LOC107744644 non-coding upstream 77395 14628442 ~ 14683002 (+)
G155774 NA non-coding upstream 211329 14548596 ~ 14549068 (+)
G155773 LOC106568166,LOC108280735,LOC103375566 non-coding upstream 212244 14547659 ~ 14548153 (+)
G155772 NA non-coding upstream 212797 14547370 ~ 14547600 (+)
G155744 NA non-coding upstream 266315 14493726 ~ 14494082 (+)
G155856 NA non-coding downstream 104186 14865914 ~ 14866479 (+)
G155897 NA non-coding downstream 217577 14979305 ~ 14980490 (+)
G155898 NA non-coding downstream 219373 14981101 ~ 14981620 (+)
G155913 NA non-coding downstream 289127 15050855 ~ 15055957 (+)
G155929 NA non-coding downstream 338592 15100320 ~ 15103379 (+)
AMCG00006034 vmac,LOC106573562 other upstream 100900 14652199 ~ 14659497 (+)
AMCG00006022 NA other upstream 335651 14420382 ~ 14424746 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other upstream 376817 14375995 ~ 14383580 (+)
G155638 NA other upstream 650527 14108173 ~ 14109870 (+)
G155637 eps15l1,LOC107592720 other upstream 661701 14097804 ~ 14098696 (+)
AMCG00006092 rps28 other downstream 341728 15103456 ~ 15105567 (+)
G155932 NA other downstream 345481 15107209 ~ 15107734 (+)
AMCG00006065 lsm4,LOC106613629 other downstream 816356 15578084 ~ 15584761 (+)
AMCG00006107 LOC107709901,LOC107680255 other downstream 1202705 15964433 ~ 15988775 (+)
AMCG00006111 smim7,LOC106573893 other downstream 1271164 16032892 ~ 16035969 (+)

Expression


Co-expression Network