G155897


Basic Information

Item Value
gene id G155897
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14979305 ~ 14980490 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196363
GTAATAAGTACCCTTCCGGATTTTATATCATTATTTCTTCGCATTTATTTCTGTGCACATCGGTGTGCCTTCAGACAAGAACAGGTGTACTCCACAGTGCAGAACGGGCAGCGATACACAACTGTATTACATCGGTAGGTTTTTAGTCCTAACACTAAAGAATGCCAATATTTCAAGTAAGGCCCATACAAATGTACACACAGTTTAGTTAAGTCAGGGGAAAATCAACCCCAACCTTAATGGAAGCTTCAGTTTACTGGGGAATCTAACCCTTGCCCAGAATAAAACATATCTGGgattttcaatgtattgattttctttttaaatatgcatatttttacttaatacacatacaccaacaccaacatttcAACAAGGCCCGCACAATTCGATGCCCAATCGAATTCAGTCGGTAGGAAAACAACCCTAACTTTCTCAAGATGCTGTCTAATGTAATCCTGCCAAAACTTAGATTGGGTAAATAGTTctaatttttgtattgtataatctTACTTAAAGAATTTAAGTTAATACTAATTAGCTAATAGTTCTTACTTTAGTTAGTACTACCTCATTAGCCCAAACGCTAAATAATACTAAGAATCTTTATGCAGAAATGCATTATGCGATACTACACTGTAGTTCAGAAACCAAAATGTTGCCCAACGCTCATTAAAACATACCACTGtcaaatgttgtatttgttacACAAATCTGTACATCAGTATAGGTTTAGTTTTCCCCACTGAAAGTCAAGCTCTATCAGagtttatttaacacaaataacacaaattgttgttttgtagGTGTTAATTAGGCTTGAAAAGGTTGGGAAACAGCTTGGGCCCATTTCATAAACCCTCCTTCATgtaaatggagagaaagagggagggagagaacaaAAAAGATATACAGATATGCAGATATGGGAACTAAAAGGTCTATTTTTTGTGCAATGGGAAGTgtaggtaaaaaataaaaaataaaaaatgaaatgcccatcctgggggaaaaaaaaagaccaacagATCAAAACCTTAAATGGTGAAACTGTAATGAAAGGCTTTCATAGACATGGGGGAAAAATGGCTTCAGAGTTCCCAATAATCcatccctttttattttcttctcaggGGACAAAGAGTGAGGAAGGCAGACCAAGCATTTAACGGGTTAAATGAGTTAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC108262233

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196363 True 1186 lncRNA 0.36 1 14979305 14980490

Neighbor

gene id symbol gene type direction distance location
AMCG00006040 nr2f6,LOC108238456,LOC103359430,LOC101171737 coding upstream 131167 14838689 ~ 14848138 (+)
AMCG00006041 NA coding upstream 151778 14819668 ~ 14827527 (+)
AMCG00006042 NA coding upstream 180450 14796612 ~ 14798855 (+)
AMCG00006055 ano8,LOC103359425 coding upstream 223095 14742197 ~ 14756210 (+)
AMCG00006053 NA coding upstream 272181 14700791 ~ 14707124 (+)
AMCG00006031 NA coding downstream 10404 14990894 ~ 14991358 (+)
AMCG00006030 NA coding downstream 38296 15018786 ~ 15041927 (+)
AMCG00006093 NA coding downstream 111527 15092017 ~ 15096837 (+)
AMCG00006091 NA coding downstream 168448 15148938 ~ 15156505 (+)
AMCG00006090 NA coding downstream 201474 15181964 ~ 15185213 (+)
G155856 NA non-coding upstream 112826 14865914 ~ 14866479 (+)
G155832 NA non-coding upstream 217577 14760397 ~ 14761728 (+)
G155790 rpl36,LOC107678109,LOC107741803,LOC107744644 non-coding upstream 296303 14628442 ~ 14683002 (+)
G155774 NA non-coding upstream 430237 14548596 ~ 14549068 (+)
G155773 LOC106568166,LOC108280735,LOC103375566 non-coding upstream 431152 14547659 ~ 14548153 (+)
G155898 NA non-coding downstream 611 14981101 ~ 14981620 (+)
G155913 NA non-coding downstream 70365 15050855 ~ 15055957 (+)
G155929 NA non-coding downstream 119830 15100320 ~ 15103379 (+)
G155931 NA non-coding downstream 125105 15105595 ~ 15106403 (+)
G155933 NA non-coding downstream 127504 15107994 ~ 15109196 (+)
AMCG00006034 vmac,LOC106573562 other upstream 319808 14652199 ~ 14659497 (+)
AMCG00006022 NA other upstream 554559 14420382 ~ 14424746 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other upstream 595725 14375995 ~ 14383580 (+)
G155638 NA other upstream 869435 14108173 ~ 14109870 (+)
G155637 eps15l1,LOC107592720 other upstream 880609 14097804 ~ 14098696 (+)
AMCG00006092 rps28 other downstream 122966 15103456 ~ 15105567 (+)
G155932 NA other downstream 126719 15107209 ~ 15107734 (+)
AMCG00006065 lsm4,LOC106613629 other downstream 597594 15578084 ~ 15584761 (+)
AMCG00006107 LOC107709901,LOC107680255 other downstream 983943 15964433 ~ 15988775 (+)
AMCG00006111 smim7,LOC106573893 other downstream 1052402 16032892 ~ 16035969 (+)

Expression


Co-expression Network