G155898


Basic Information

Item Value
gene id G155898
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14981101 ~ 14981620 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196365
TACTCAACCagatttcaattttattttccaccaGCACCCAAAAAACCGACTACATACATTCCCAGCACACTTACGCACCAAGCGGCTTTCCTCACACACGATTGGCAGATCATAAACACTACTGATGTGCAATAATTAAGCCCGCACTTGTGCCACGCTGGGTCACGAACAGATTGTTATCAGACCGAAAACAGAGATATCTGAACTCCAGGGATCGCTCCTCTGGCTTGCAAAGATCCTCTGGGGCTAATGGGCAGAAGTCTGGGGAGATGGGGCAGGGCGTCATCTTCCCTAATGTCTGGAATTCCCTTCTGCACTCCACGATATAACCCCCACGTCTGCTAGAGAGCCTGAAATCggtcttttcttctttttcacatCATGATAAATTGCGATTTCTTCCCCTGTGATTTGTAGTTGATCCAAGTTCAATGCGTCTGCTACGATGCGGGATAAGTGCCTATAAATCTGCCAGACAGGGATGCTGGATTGTGATAGAAATAGCGCCATATACCTGGNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196365 True 520 lncRNA 0.47 1 14981101 14981620

Neighbor

gene id symbol gene type direction distance location
AMCG00006040 nr2f6,LOC108238456,LOC103359430,LOC101171737 coding upstream 132963 14838689 ~ 14848138 (+)
AMCG00006041 NA coding upstream 153574 14819668 ~ 14827527 (+)
AMCG00006042 NA coding upstream 182246 14796612 ~ 14798855 (+)
AMCG00006055 ano8,LOC103359425 coding upstream 224891 14742197 ~ 14756210 (+)
AMCG00006053 NA coding upstream 273977 14700791 ~ 14707124 (+)
AMCG00006031 NA coding downstream 9274 14990894 ~ 14991358 (+)
AMCG00006030 NA coding downstream 37166 15018786 ~ 15041927 (+)
AMCG00006093 NA coding downstream 110397 15092017 ~ 15096837 (+)
AMCG00006091 NA coding downstream 167318 15148938 ~ 15156505 (+)
AMCG00006090 NA coding downstream 200344 15181964 ~ 15185213 (+)
G155897 NA non-coding upstream 611 14979305 ~ 14980490 (+)
G155856 NA non-coding upstream 114622 14865914 ~ 14866479 (+)
G155832 NA non-coding upstream 219373 14760397 ~ 14761728 (+)
G155790 rpl36,LOC107678109,LOC107741803,LOC107744644 non-coding upstream 298099 14628442 ~ 14683002 (+)
G155774 NA non-coding upstream 432033 14548596 ~ 14549068 (+)
G155913 NA non-coding downstream 69235 15050855 ~ 15055957 (+)
G155929 NA non-coding downstream 118700 15100320 ~ 15103379 (+)
G155931 NA non-coding downstream 123975 15105595 ~ 15106403 (+)
G155933 NA non-coding downstream 126374 15107994 ~ 15109196 (+)
G155934 NA non-coding downstream 127973 15109593 ~ 15111175 (+)
AMCG00006034 vmac,LOC106573562 other upstream 321604 14652199 ~ 14659497 (+)
AMCG00006022 NA other upstream 556355 14420382 ~ 14424746 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other upstream 597521 14375995 ~ 14383580 (+)
G155638 NA other upstream 871231 14108173 ~ 14109870 (+)
G155637 eps15l1,LOC107592720 other upstream 882405 14097804 ~ 14098696 (+)
AMCG00006092 rps28 other downstream 121836 15103456 ~ 15105567 (+)
G155932 NA other downstream 125589 15107209 ~ 15107734 (+)
AMCG00006065 lsm4,LOC106613629 other downstream 596464 15578084 ~ 15584761 (+)
AMCG00006107 LOC107709901,LOC107680255 other downstream 982813 15964433 ~ 15988775 (+)
AMCG00006111 smim7,LOC106573893 other downstream 1051272 16032892 ~ 16035969 (+)

Expression


Co-expression Network