G155899


Basic Information

Item Value
gene id G155899
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14980384 ~ 14981621 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196366
NNNCCAGGTATATGGCGCTATTTCTATCACAATCCAGCATCCCTGTCTGGCAGATTTATAGGCACTTATCCCGCATCGTAGCAGACGCATTGAACTTGGATCAACTACAAATCACAGGGGAAGAAATCGCAATTTATCATGatgtgaaaaagaagaaaagaccGATTTCAGGCTCTCTAGCAGACGTGGGGGTTATATCGTGGAGTGCAGAAGGGAATTCCAGACATTAGGGAAGATGACGCCCTGCCCCATCTCCCCAGACTTCTGCCCATTAGCCCCAGAGGATCTTTGCAAGCCAGAGGAGCGATCCCTGGAGTTCAGATATCTCTGTTTTCGGTCTGATAACAATCTGTTCGTGACCCAGCGTGGCACAAGTGCGGGCTTAATTATTGCACATCAGTAGTGTTTATGATCTGCCAATCGTGTGTGAGGAAAGCCGCTTGGTGCGTAAGTGTGCTGGGAATGTATGTAGTCGGTTTTTTGGGTGCtggtggaaaataaaattgaaatctGGTTGAG
>TU196367
NNNCCAGGTATATGGCGCTATTTCTATCACAATCCAGCATCCCTGTCTGGCAGATTTATAGGCACTTATCCCGCATCGTAGCAGACGCATTGAACTTGGATCAACTACAAATCACAGGGGAAGAAATCGCAATTTATCATGatgtgaaaaagaagaaaagaccGATTTCAGGCTCTCTAGCAGACGTGGGGGTTATATCGTGGAGTGCAGAAGGGAATTCCAGACATTAGGGAAGATGACGCCCTGCCCCATCTCCCCAGACTTCTGCCCATTAGCCCCAGAGGATCTTTGCAAGCCAGAGGAGCGATCCCTGGAGTTCAGATATCTCTGTTTTCGGTCTGATAACAATCTGTTCGTGACCCAGCGTGGCACAAGTGCGGGCTTAATTATTGCACATCAGTAGTGTTTATGATCTGCCAATCGTGTGTGAGGAAAGCCGCTTGGTGCGTAAGTGTGCTGGGAATGTATGTAGTCGGTTTTTTGGGTGCtggtggaaaataaaattgaaatctGGTTGAGTACCTTTTTTTCTATGTTACTGGGACTATGTGGTGGGACTCCTATATGTTCCAGTTCCAGGTGTCTGGCTTCCTGCTTGGTCGTTTTGTCTGAAGAAGTAGGAACGCAAAGTTGCTGCCAAAAAGAGAAAGTCCTGAAGCTCTGATAACTTCTGATGGGATCCATTCGCAGGATGAACCTCTTTATTCCTTTGAAATGGTATCCAGTTGGCTTCTTGCTTGAGGTGTACAGATGTAGTACCTATAGAATAAAACCCAGAATCCCTCATTCTCTCTCCATAACATAGAAATCTCATTTGGTGGAGAGTTTAGTGGAATTAAGGAATCCATAAGGCGCCAACTAATAGGGATTAGGAGCTGATCAGTAAATTTCAGTTTACACATGAAGAGGCTAGATTCCTTTCTGCGCATTAGCCGCACAGAGCAGGAATGATCAAAATCCAGTTAATAACTTGTTCTTCCGTTTAATTGAGAAACGGCGTCGGCTCGCAATATGTTAAAAAGCGGGCAGCTCAATCAATAACAAAAGGCTGAAAATGGAGCCCTGTTTATTACCTCAgctgatttttttctctcttctgtgATGGATTGACTTCTATCACTCACAGCTTCTGTAACTCATTTAACCCGTTAAATGCTTGGTCTGCCTTCCTCACTCTTTGTCCcctgagaagaaaataaaaagggatgGATTATTGGGAACTCTGAAGCCATTTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196366 False 519 lncRNA 0.47 1 14981103 14981621
TU196367 True 1238 lncRNA 0.44 1 14980384 14981621

Neighbor

gene id symbol gene type direction distance location
AMCG00006033 LOC107589798,LOC107718068,LOC107722564,LOC107585128 coding downstream 48999 14920403 ~ 14931385 (-)
AMCG00006032 NA coding downstream 73226 14889140 ~ 14907158 (-)
AMCG00006044 NA coding downstream 104663 14866709 ~ 14875721 (-)
AMCG00006046 NA coding downstream 119649 14852157 ~ 14860735 (-)
AMCG00006047 NA coding downstream 128505 14850781 ~ 14851879 (-)
AMCG00006096 NA coding upstream 180 14981801 ~ 14992261 (-)
AMCG00006103 NA coding upstream 49366 15030987 ~ 15031803 (-)
AMCG00006095 NA coding upstream 60562 15042183 ~ 15044491 (-)
AMCG00006097 NA coding upstream 69300 15050921 ~ 15060761 (-)
AMCG00006098 NA coding upstream 92579 15074200 ~ 15077768 (-)
G155783 NA non-coding downstream 410548 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 488455 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 555638 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 610202 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 657270 14318979 ~ 14323114 (-)
G155957 NA non-coding upstream 118688 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 197430 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 223248 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 225899 15207520 ~ 15318177 (-)
G156014 NA non-coding upstream 291192 15272813 ~ 15330546 (-)
AMCG00006043 NA other downstream 196104 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 297404 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 470770 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 638781 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 808777 14159131 ~ 14171607 (-)
AMCG00006102 slc5a5 other upstream 16879 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 451811 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 972455 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1472663 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1523743 16505364 ~ 16521689 (-)

Expression


Co-expression Network