G155933


Basic Information

Item Value
gene id G155933
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15107994 ~ 15109196 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196405
CAGTGGTTGCCAACACAATGTTAACCTCTCGGGATCCTTGTCTTAAACGTGCAACTTAcgttttgtttgtaaattagCCAGAAACAATAAAGGATTTGTTTGACAGCTTTGATAATGATCCAGGGTAATTATACATACCCCTGGAATCTTATACCTTATAACAGACTGTCATAACTAAATCAAAGCTTGAAATGATGAGAACTCAGTCAAAATTGACTCTCTCCCCCTTATTTCTTCAAAGGGAGTCCTTGGGAGAAAAGTCTTGTGATCTTTTGAAAGCTTctgatgttttgcattttcaccAAAGGCTCTGGTTACAGTGCAGATATTTAACAAATCTGAGTACCTATCCAGAACTCAAAAAACTTGGCTTgaataacacacacatgcacataacCTCTATTATTCTCAAATTTCAAATTCTCAAAACCCCCCCAAGGCTTTCCCTCTGTAAACCAAAGTCTGACTTTTAGTGCAgccttttcttctttcattttatgACTTCACTTTACACTTACATTGTggagtaaaataaagaaaacaaaaccgtaTTCAAATGCTTTAAACATACTGATACAATGGTTcccaaaatatgtaattctgATTACATGTATGTTGGCATTTTTCCCCTACTGGCCACCGACAGCAaaaaccaaaaggaaaaataatgcaACTGCAATTTGGAAGCTATAATTTGTAGTGGTCTATGACTTAATGCTGTCACAAAAAGATAATCTCTCTATAATATAGTGGCACTAAAGTTTTGGTTTCAGTATTGGCAAGTTACATTGTATACACACTAATCTGGCGTAACCACCTATAAATAAAAGCTTGAGGGTGCAGCTGAGCTAACAGTGGCATTAGATATAAGTTACAAAAGAAAATTCCTGTCCGTCTGTCTGGCAAGAGCTGTGATTTCTCTTATTTCTCCAGTCGATAGCTGTTAACCCCATGTTACTTAGTTGAGGTGTAGGCGTGTTGGAGCGGGGATTCCCTCACGTTGTCCACAATGGAGATGTCACAGCCAGGCTGCTCCAGAAGCAGTTTGACGATCTCGGCGCGCCCGTGTTCACTGGCGCACATCAGCGCGGTGGAGCCCTCGTCGTCCTGGATGTTGACGCTGGCGCCGCAGTCCAGCAGGGCTTGAACCATGTCCTGCCGTCCGTGACTGACTGCCAACATCAGGGCCGTCTGCCCCGCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196405 True 1203 lncRNA 0.42 1 15107994 15109196

Neighbor

gene id symbol gene type direction distance location
AMCG00006093 NA coding upstream 11157 15092017 ~ 15096837 (+)
AMCG00006030 NA coding upstream 66067 15018786 ~ 15041927 (+)
AMCG00006031 NA coding upstream 116636 14990894 ~ 14991358 (+)
AMCG00006040 nr2f6,LOC108238456,LOC103359430,LOC101171737 coding upstream 259856 14838689 ~ 14848138 (+)
AMCG00006041 NA coding upstream 280467 14819668 ~ 14827527 (+)
AMCG00006091 NA coding downstream 39742 15148938 ~ 15156505 (+)
AMCG00006090 NA coding downstream 72768 15181964 ~ 15185213 (+)
AMCG00006070 LOC107661085,LOC108271288 coding downstream 79028 15188224 ~ 15196741 (+)
AMCG00006071 cnn2,LOC107688471,LOC107585101,LOC107550622,LOC107709904,LOC107680261 coding downstream 95658 15204854 ~ 15215919 (+)
AMCG00006072 NA coding downstream 120769 15229965 ~ 15271081 (+)
G155931 NA non-coding upstream 1591 15105595 ~ 15106403 (+)
G155929 NA non-coding upstream 4615 15100320 ~ 15103379 (+)
G155913 NA non-coding upstream 52037 15050855 ~ 15055957 (+)
G155898 NA non-coding upstream 126374 14981101 ~ 14981620 (+)
G155897 NA non-coding upstream 127504 14979305 ~ 14980490 (+)
G155934 NA non-coding downstream 397 15109593 ~ 15111175 (+)
G155974 NA non-coding downstream 76678 15185874 ~ 15187225 (+)
G156042 NA non-coding downstream 321280 15430476 ~ 15431939 (+)
G156082 NA non-coding downstream 452407 15561603 ~ 15605879 (+)
G156130 NA non-coding downstream 669003 15778199 ~ 15812111 (+)
G155932 NA other upstream 260 15107209 ~ 15107734 (+)
AMCG00006092 rps28 other upstream 2427 15103456 ~ 15105567 (+)
AMCG00006034 vmac,LOC106573562 other upstream 448497 14652199 ~ 14659497 (+)
AMCG00006022 NA other upstream 683248 14420382 ~ 14424746 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other upstream 724414 14375995 ~ 14383580 (+)
AMCG00006065 lsm4,LOC106613629 other downstream 468888 15578084 ~ 15584761 (+)
AMCG00006107 LOC107709901,LOC107680255 other downstream 855237 15964433 ~ 15988775 (+)
AMCG00006111 smim7,LOC106573893 other downstream 923696 16032892 ~ 16035969 (+)
AMCG00006113 slc35e1,LOC106573890 other downstream 944839 16054035 ~ 16066898 (+)
AMCG00006089 NA other downstream 1013932 16123128 ~ 16145238 (+)

Expression


Co-expression Network