G156042


Basic Information

Item Value
gene id G156042
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15430476 ~ 15431939 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196547
tttttttttttttttttttttttaagaatagatCGACTGTCCGTCGCCATCAGCACAAACAATATTCcagatacaaaaaatgtaaacagggtTCCCAGTCTCTCTATTcagctttaatttaaatcaataataaaaaagggttttatttttcattttttttcattttgttttttttctctgagcCTTTTaccatttattgtaaaatgttaaaaaaatagaatatatatatatatatatatatatatatattacatttaaacagactGCAATTTTTTAAGAGAATTTTGTACTATTAAATGTATGCTtagcttgttttttaatttaaagatgtaGAATTCCCTCAGGTGGCAGTTTTAGTGCATTTTGCACTTCTtcggaaaacaaaacaaaaaaaaaacatttcaaataaaagttttgaagaaaaaaatcttcatGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196547 True 436 lncRNA 0.24 2 15430476 15431939

Neighbor

gene id symbol gene type direction distance location
AMCG00006078 NA coding upstream 69 15402929 ~ 15430407 (+)
AMCG00006077 ndufs7,LOC107747413,LOC107597168 coding upstream 33379 15392880 ~ 15397097 (+)
AMCG00006049 NA coding upstream 52371 15373975 ~ 15378105 (+)
AMCG00006050 NA coding upstream 58338 15366054 ~ 15372138 (+)
AMCG00006052 NA coding upstream 74371 15328797 ~ 15356105 (+)
AMCG00006076 rps15,rig,LOC107578086,LOC107685215 coding downstream 1602 15433541 ~ 15436677 (+)
AMCG00006066 ddx49 coding downstream 105622 15537561 ~ 15544353 (+)
AMCG00006060 LOC106613630,LOC106573907 coding downstream 170993 15602932 ~ 15603849 (+)
AMCG00006059 NA coding downstream 176760 15608699 ~ 15614431 (+)
AMCG00006061 NA coding downstream 208333 15640272 ~ 15640478 (+)
G155974 NA non-coding upstream 243251 15185874 ~ 15187225 (+)
G155934 NA non-coding upstream 319301 15109593 ~ 15111175 (+)
G155933 NA non-coding upstream 321280 15107994 ~ 15109196 (+)
G155931 NA non-coding upstream 324073 15105595 ~ 15106403 (+)
G155929 NA non-coding upstream 327097 15100320 ~ 15103379 (+)
G156082 NA non-coding downstream 129664 15561603 ~ 15605879 (+)
G156130 NA non-coding downstream 346260 15778199 ~ 15812111 (+)
G156155 NA non-coding downstream 401140 15833079 ~ 15833294 (+)
G156279 NA non-coding downstream 1032069 16464008 ~ 16467676 (+)
G156302 NA non-coding downstream 1072831 16504770 ~ 16505206 (+)
G155932 NA other upstream 322742 15107209 ~ 15107734 (+)
AMCG00006092 rps28 other upstream 324909 15103456 ~ 15105567 (+)
AMCG00006034 vmac,LOC106573562 other upstream 770979 14652199 ~ 14659497 (+)
AMCG00006022 NA other upstream 1005730 14420382 ~ 14424746 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other upstream 1046896 14375995 ~ 14383580 (+)
AMCG00006065 lsm4,LOC106613629 other downstream 146145 15578084 ~ 15584761 (+)
AMCG00006107 LOC107709901,LOC107680255 other downstream 532494 15964433 ~ 15988775 (+)
AMCG00006111 smim7,LOC106573893 other downstream 600953 16032892 ~ 16035969 (+)
AMCG00006113 slc35e1,LOC106573890 other downstream 622096 16054035 ~ 16066898 (+)
AMCG00006089 NA other downstream 691189 16123128 ~ 16145238 (+)

Expression


Co-expression Network