Gene
RNA
| Item | Value |
|---|---|
| gene id | G156113 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 15615562 ~ 15615787 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04913 | Ovarian steroidogenesis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU196640 | True | 226 | lncRNA | 0.53 | 1 | 15615562 | 15615787 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006069 | pgpep1,LOC103360783,LOC104958139 | coding | downstream | 40875 | 15565462 ~ 15574687 (-) |
| AMCG00006067 | upf1,LOC105907049 | coding | downstream | 56213 | 15544838 ~ 15559349 (-) |
| AMCG00006068 | NA | coding | downstream | 86238 | 15496753 ~ 15529324 (-) |
| AMCG00006082 | NA | coding | downstream | 126881 | 15483162 ~ 15488681 (-) |
| AMCG00006079 | arrdc2,LOC106573914 | coding | downstream | 135244 | 15469241 ~ 15480318 (-) |
| AMCG00006075 | NA | coding | upstream | 157891 | 15773678 ~ 15776508 (-) |
| AMCG00006085 | NA | coding | upstream | 162420 | 15778207 ~ 15784001 (-) |
| AMCG00006086 | NA | coding | upstream | 173560 | 15789347 ~ 15818856 (-) |
| AMCG00006087 | NA | coding | upstream | 225125 | 15840912 ~ 15877424 (-) |
| AMCG00006116 | comp | coding | upstream | 385766 | 16001553 ~ 16012344 (-) |
| G156104 | NA | non-coding | downstream | 30796 | 15581857 ~ 15584766 (-) |
| G156049 | NA | non-coding | downstream | 183632 | 15427308 ~ 15431930 (-) |
| G156048 | NA | non-coding | downstream | 191712 | 15417978 ~ 15423850 (-) |
| G156028 | NA | non-coding | downstream | 247921 | 15366104 ~ 15367641 (-) |
| G156014 | NA | non-coding | downstream | 285016 | 15272813 ~ 15330546 (-) |
| G156203 | NA | non-coding | upstream | 331421 | 15947208 ~ 15947527 (-) |
| G156207 | NA | non-coding | upstream | 379000 | 15994787 ~ 16000039 (-) |
| G156225 | NA | non-coding | upstream | 446946 | 16062733 ~ 16063072 (-) |
| G156228 | NA | non-coding | upstream | 450882 | 16066669 ~ 16071528 (-) |
| G156344 | NA | non-coding | upstream | 1059011 | 16674798 ~ 16676047 (-) |
| G156088 | rps15,LOC107680474,LOC107685215,LOC107578086 | other | downstream | 123920 | 15433432 ~ 15491642 (-) |
| AMCG00006102 | slc5a5 | other | downstream | 607583 | 14998500 ~ 15007979 (-) |
| AMCG00006043 | NA | other | downstream | 831282 | 14782506 ~ 14784280 (-) |
| AMCG00006037 | rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 | other | downstream | 932582 | 14679797 ~ 14682980 (-) |
| G155770 | LOC103376870 | other | downstream | 1105948 | 14509233 ~ 14509614 (-) |
| G156206 | klhl26,LOC107680559,LOC107597147 | other | upstream | 338289 | 15954076 ~ 15957090 (-) |
| AMCG00006083 | NA | other | upstream | 838497 | 16454284 ~ 16462165 (-) |
| AMCG00006118 | NA | other | upstream | 889577 | 16505364 ~ 16521689 (-) |
| G156341 | NA | other | upstream | 1035753 | 16651540 ~ 16680772 (-) |
| AMCG00006127 | NA | other | upstream | 1332210 | 16947997 ~ 16963650 (-) |
