G156341


Basic Information

Item Value
gene id G156341
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 16651540 ~ 16680772 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196919
NNCTGCTGACAAGAGCAAGTTTGTTGCCACAGTGAAGGACTGGATGTCCCTCCCCATTGGCAATGAATAGGCTCTGGAAGATGCTCTGGTCACCATTGGGCCTTTCGCAATCACCATTGATGCAACAACCCGCAATTTCCAGTTTTACCAGAATGGAGTCTTCTATGACCCCCAGTGTACCACCTGGAAACAGAATCATGCCATGGTCTTGGTTGGATTTGGTACTGCAGGAACTGACAATTACTGGATCATCAAGAACAGCTGGGGCACCGGCTGGGGAGAAAACGGCTACCTTCGTCTGGCCAAGGACAAAGGCGACGAATGTGGCATTAGCCAGAATGGAGTCATCCCATTGGTGTGACCACATTCTGCGGCATAGAGTATAATGGGCTTTGCCTTTTCTCTTCCTTCAATGTCCATCAATCCATTATTCCagttaataaataatcacattGCACTGAA
>TU196920
NNCTGCTGACAAGAGCAAGTTTGTTGCCACAGTGAAGGACTGGATGTCCCTCCCCATTGGCAATGAATAGGCTCTGGAAGATGCTCTGGTCACCATTGGGCCTTTCGCAATCACCATTGATGCAACAACCCGCAATTTCCAGTTTTACCAGAATGGAGTCTTCTATGACCCCAAGTGTACAATCTGGAAACAGAATCATGCCATGGTCTTGGTTGGATTTGGTACTGTAGGTACTGAAAATTACTGGACCATCAAGAACAGCTGGGGCCCCTACTGGGGAGAAAACGGTTATCTTCGTCtgaccaaggacaaaggcaatCACTGTGGCATTGGGCAGTATGGAGTCGTCCCATTTGTGTGACTACATCATGCAGTGTGGAAGAACCTGGGTGGTGTGGGAGGCCTTGACTTCCTATTCCTTTAATGTCCATCAATGTATACTAATAAATCCTGTATAATTTCCTAAA
>TU196921
NATTTAGGCTTGCAAAGCTTGGGACACTTGAGAAATCATGCATTATTCgtatttatttgaaaccatAATCAAGCTGCTTTTTTAAGATCTGTGTTTCTAATTTTAGACTGCCACTTCAATTTAATTGACTTGTCCTCTGGTCCTAGTTTTGTTGATGAGCTAGAAATAGTTGTTTTGTGGTGGTGAAGGGGCAAGACAAGTCAGGTTAAAATTGTCATTGTCAGTGCTGCCCCACAGTAACATTGTTCTGCTCTTTTCCAGCTGGGGCACCAGCTGGGGAGAAAACGGCTACCTTCGTCTGGCCAAGGACAAAGGCGACGAATGTGGCATTAGCCAGAATGGAGTCATCCCATTGGTGTGACCACATTCTGCGGCATAGAGTATAATGGGCTTTGCCTTTTCTCTTCCTTCAATGTCCATCAATCCATTATTCCagttaataaataatcacattGCACTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196919 False 462 TUCP 0.47 3 16669801 16671387
TU196920 True 467 lncRNA 0.46 3 16651540 16671387
TU196921 False 462 lncRNA 0.42 2 16669801 16680772

Neighbor

gene id symbol gene type direction distance location
AMCG00006117 NA coding downstream 13574 16627973 ~ 16637966 (-)
AMCG00006120 NA coding downstream 85383 16528222 ~ 16566157 (-)
AMCG00006119 NA coding downstream 150962 16498652 ~ 16500578 (-)
AMCG00006084 ptbp1,LOC106613576 coding downstream 164313 16464012 ~ 16487227 (-)
AMCG00006110 LOC106574064,LOC106613575,LOC105011408 coding downstream 364212 16277086 ~ 16287328 (-)
AMCG00006144 med16,LOC106613614 coding upstream 13940 16694712 ~ 16703925 (-)
AMCG00006145 NA coding upstream 41438 16722210 ~ 16749395 (-)
AMCG00006129 NA coding upstream 155107 16835879 ~ 16844932 (-)
AMCG00006126 wdr18,LOC106613619 coding upstream 222821 16903593 ~ 16905803 (-)
AMCG00006128 NA coding upstream 242123 16922895 ~ 16941137 (-)
G156228 NA non-coding downstream 580012 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 588468 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 651501 15994787 ~ 16000039 (-)
G156203 NA non-coding downstream 704013 15947208 ~ 15947527 (-)
G156113 NA non-coding downstream 1035753 15615562 ~ 15615787 (-)
G156378 NA non-coding upstream 184326 16865098 ~ 16922863 (-)
G156668 NA non-coding upstream 1451557 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1457747 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1752834 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1851290 18532062 ~ 18532447 (-)
AMCG00006118 NA other downstream 129851 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 189375 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 694450 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 1159898 15433432 ~ 15491642 (-)
AMCG00006102 slc5a5 other downstream 1643561 14998500 ~ 15007979 (-)
AMCG00006127 NA other upstream 267225 16947997 ~ 16963650 (-)
G156907 NA other upstream 2594428 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2768159 19448931 ~ 19463205 (-)
G157059 NA other upstream 4029027 20709799 ~ 20712216 (-)

Expression


Co-expression Network