G156598


Basic Information

Item Value
gene id G156598
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 17842139 ~ 17843976 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197237
aaTTGTTGTACTTGAGGGTTGTTCATCAGACTTGATGCCTAGAAACATATGAAAGATTGAAATCAGACAGTTCACTGATAGCAAAATCATAATTGTTTCATACTGAAGGTACCTTGTTAGCAACAGACATGATTTACAAGAACTGTCACATTTACAGATCTAGTAAACACAAACTAATCAGTTGTAACTTATCTGAAAAAGTTAATGGGAGGTAAAAACAGGGCTGTCAGTCAAAAAACCACTCTCCGACTCAGTGCAGTTTTAACCTTCCCACCATTTAAGTGATGCAGAagcttactttttttttaaccaataataTAATGCAGGAAATTACAGTAGACAAGGTTGGTTCAAAATGTTATGAGCTATATATAGAACAGTACACCAGAGAccactgctgttgctgctgcttatACTCCACATTGATAGCCCTTCAGAAGTCAGTTCCCAGTATCCCACATTGCTTTGTTCATCAGTTTCACCTTGTCTTTTGCAGCTAGACCACAATGGACGATGagtatccaaaaaaaaaaaaaaaaaaaacaacaacaaagcacagTATGGTCACTTATGTATTTTCCATGTTAATTGGCctacattttcaatgtttctAGTGAAAGCAAATATGCTGCTTTGGGTCTATTTTTAGTATGCATTAAGGTTTATCTGCAAAAGAAAGGGAGCAAATAAGTAACAAAACAGTCTTTAAGTTTTCAGATTGAGTACACTGAATATGGACAATCTTTGGCTGGAATTCGTCAGCCACCATGAGGACTATGTGTTAGACACTTACAACTCAGCAGCATACTTAAAATGCAGCTTCCTTTCATTCTAGTTTTGTGACCTTACCATGTTCATAAAGCCAGGGTTGCTAAGTAATCCAGCCAGGTCAACTCCACCCATTCCTCCTGTGGACTTggcatttctttcattttctgctCTGCTATTTTCAAGTTAGACTTATAGGTTTCATTTTCTGGGTCGAGTTCCAAAGCCTTCTTGTAGTAGCTCACAgcttctgtgtgtttatttaaactaGCCAGAGCTAGCCTGTAGAGACAAAAACATCCTTCAGAAAGAGAACtgtaatacattcatatacatatgACTATCAATAACCATTTCTTTACTGATTTCTGAGTAAAAGAAATAGCAGGAATAATGGGAAACAACCCTGGCAGTTCTCACCCCATTCTACCATAAGCTTTGCTGTAGTTGGGGTCGATGGCAATTGCTTGTTCACAGTCCTGTACAGCTCCAGCATAGTTTCCCAGTTTGCTGTATGCCGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197237 True 1291 lncRNA 0.38 2 17842139 17843976

Neighbor

gene id symbol gene type direction distance location
AMCG00006191 NA coding upstream 30680 17788983 ~ 17811459 (+)
AMCG00006136 NA coding upstream 323306 17511902 ~ 17518833 (+)
AMCG00006150 NA coding upstream 720634 17104337 ~ 17121505 (+)
AMCG00006151 NA coding upstream 740278 17095682 ~ 17101861 (+)
AMCG00006130 NA coding upstream 765875 17070040 ~ 17076264 (+)
AMCG00006189 thop1,mepd coding downstream 8063 17852039 ~ 17877059 (+)
AMCG00006187 NA coding downstream 36007 17879983 ~ 17905624 (+)
AMCG00006162 LOC106613602 coding downstream 104547 17948523 ~ 17960210 (+)
AMCG00006164 NA coding downstream 160601 18004577 ~ 18008371 (+)
AMCG00006169 diras1,LOC106573976,LOC105906138,LOC106613605 coding downstream 272662 18116638 ~ 18130496 (+)
G156567 NA non-coding upstream 64269 17774665 ~ 17777870 (+)
G156564 LOC100846954,LOC107575789 non-coding upstream 133418 17707670 ~ 17708721 (+)
G156521 NA non-coding upstream 270607 17567559 ~ 17571532 (+)
G156509 NA non-coding upstream 294778 17535631 ~ 17547361 (+)
G156506 NA non-coding upstream 317389 17523234 ~ 17524750 (+)
G156671 NA non-coding downstream 314864 18158840 ~ 18223148 (+)
G156769 NA non-coding downstream 898626 18742602 ~ 18749749 (+)
G156771 NA non-coding downstream 912950 18756926 ~ 18757205 (+)
G156772 NA non-coding downstream 913290 18757266 ~ 18757542 (+)
G156777 NA non-coding downstream 933216 18777192 ~ 18777554 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 77911 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 107055 17662190 ~ 17735084 (+)
AMCG00006149 NA other upstream 714506 17123205 ~ 17127633 (+)
G156327 NA other upstream 1212957 16627793 ~ 16629182 (+)
AMCG00006089 NA other upstream 1696901 16123128 ~ 16145238 (+)
G156640 NA other downstream 129765 17973741 ~ 17980637 (+)
AMCG00006138 NA other downstream 346248 18190224 ~ 18356589 (+)
AMCG00006174 NA other downstream 634152 18478128 ~ 18480087 (+)

Expression


Co-expression Network