G156769


Basic Information

Item Value
gene id G156769
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 18742602 ~ 18749749 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197442
CCTCGTGGTTGATTTGCAATACAACCAAAATGCTGTCATCTCCAAGCTGGGTTTCAACATCAGTGACTGACTATTCACTTCTTTAGTAATGAGCCCTACCTGCATGTTTTACAATACCAACACCGCCTCCCTGTGGAAGAAAGGACTGACAACACTGTAAAAACACTTACAGACAGGGCTGGGAACAAGTCTGCCCAAAGACTTTGGGGGGGAATATCATTGAAGTCTTTAAAGTCCTGTTTCTGCCATTTCATTTCCAGGTTCCACTGAGCTGTgttagaaatgcatttcagtgtcTCGATGGTTACTGCTAGCAAAAATGCATAAAGGAGCAATCCAAATCAATTATAACAGTCTTCACCTATACAGTGGATTGAATTACATACATGGTTTGATAAACTGATTACACAAAATCACGGCTTTTTAATTTATGGAATTTGTCGTTCTGGTGGGGTTCCGTTTCTCACCCCCATCACGCAGTCATCAGTGTTCTTCATTGATTGGCAAATTAGGATCTTTgttaatgttttggttttttaaCCCCAATACAGACACCAACAGTGGAGTCATTTCTAATCCAGATGATGAGCTTCATGAGGACTCGAAAGAGGAAAATCCCAAATCGACGGTCCAATCACCATTTTTGAGGACATGGTTTTACTCGATGGCCTGAGAGAGTGGAATATCAGTGTAGGACAAGCTCTTGCTGTCCTGCCACACTACGGAGACACCTTCTTGAATATCTGCTCATTGGCCTCCTGGACTGCATCACTCACTTTTCtggaatagtttttttttttcattttgtaattgcactgtcaatccaatccaatccaaacTCCCCTATCCGCCACAAGCCTTTCTACCAGGCCAGGAGAGAAGACCACACAATACTCGTCAACTATAGAACATACTGACAGGAAAAACCTAATTGATTCTCTCTACAAGATCCAACAAACACGACTTAGACCTGGTGAAGCACTAAGCAAGACGCCGGCAGTATACTGAGGACAGTCCTTTGCAGGCTTCTAAGCCAACCAACCCTGAATGAAGGGGAAACAACATCACCGCTAACAAGGTCCCCGTTTATACGAAACCCCCAACTTGTGCTCTTTTTGCCAGACAACGGACAAGCAAAGCAAGAGAATCAACCTCCATAACAGCCAcccaaatacaaaacacaagaaaggaAGGCAGAGAACAGAAGAGATGGGGTTAACTCAGTGAAAAGGTGGGGGAAATGGGAACTGAAAGAAGACTGACAGGAAACTGATTAATGGGACATGTACCTCAGCGTAGAGTGTAATAATGGAGCTGAAGTTTTTAGTGACTGGACACTGAGAAGACTAATCAGATGGAGGCTTGTGAGGAAAGGAAGATACAAGGAAGATACAAGTAAGGGGAAAAAGACAGATGCATCCAGCTCAGAGCAGACTGGGGAAACCTTTCCTTTGGCCATCAATTGGGTTTAATATGTACACAGGAATGATACACACTCACAGTGGTTCAGCAATTAAAAGGGACTTTGGCCCAGtcttttatgaaaaaaaattgtgttttgttttcttgtatgaGAGCTGGCCAGTTACAAGTCTTAAatatggagggaaaaaaaaaaaaatgtgaatagaGCAAACACTGGGGTTAGTTTACTTGAGCATCGGTTACTCAGCTTTTATAACAGAGCTGCGTGAAGGCAAGAGAGTGTGTCTAAGTACTGtatacatacagaaaaacagCTCACAATGGGTGATGTACTCAAGCAGGTGTTAAGTGCAAAACCCTGCCAATTAACTGGTCCATTTCCACCAAGCTTGGCAGCTCACTCTGAATACAGGCTCACAAGGGCCACAGTCATTTACACCAGGAATTTTCTAACCTGATCCTTGAGTACCCTTATGACCCGGACCTTGAGTCAAATTAGAGTTCAAATGCTGAATTCCAGCAGTTTTTGTGAGCCTGGATTACAATTAGTGCTCTTTTGTTCAGTCAGTTATGCCGTAGACTTACAATGAGGTGAAAGGTAATAtacaaagcaatataaatacatattgttcagGTATTTTGTAATGGTCAGCAAGCAAAATTAACCTGTAGAGGTTCACATATATATCACAGTTGTATATCTTAAGGCATTGCAATGGTGGAATGGCAAATAAGACAATTGTATCTGATCCCAGGTTTGCTATGACTTCCTAGTTTTTCCTTCCAAATAAGCTTCAAGACCCAAACACATAAGTGGAACGATTCACTCATTTTCTCATTCCAAAACTCTTTCCTATGGTCAAGGTCAAACAGACAGCTCCATCAACATCTCCAGCCCTCTCAGGAAATCTTTTCAGGATCTATTTGTCCAGTATAAAAGGTGTGTTTGGCATGTGTATTTGGTTGAGCTGCcatgcatttaaactgaacACCATCTAGTAAAACTCACTGCAGTAAAGGTTAATAAACAGTCTCACCTGGAACAATAAAAGCTGCTACTACAGGTTGctccttctcactctctcttgcTCGTCCTGAGACTACAACCAAGGCCTCAGACCTGCCCACCCTTACACATGTCAGAGTCCTGTGGTGCAGTATGCAAATCTGGAGGCAGTGTAAGAATGAACAGTGGCAGACAAAACTGAATACGGTTATCTACAACCTTTCAGTGCCACACATCTGGACCAAATCCCTTTTCAGTTGCTCTCTTAGACCCACTGAAAAAAGCACTACAGATTGGATAAGGTTTGAGTCATCGGTACTGAGGAGCATACTATGCTGTATGGAAAAACAGAACCTTTATGACCGATCAACAAACAgcacaaagatttcaaacattttagagATGTGCATTTAGACACTGAAGACTGTAgtctgttcaaaataaatactgattcACAATGAATTAGTCATCAAATGGCTGCAATTCTGTGGTTATTATTGTCTGCTTGgattaagcaatggctttttatAGGCTGTTATACCGACCTTGCAGTTTATAGATGCTAATGTGGTCACTGGTCTATGGGATCATGgggtgattaaaaaaataaaaaataaataaattggacaaaatgaaaatgaaaatcactaCATTACATGAGGTGTCAATCTCTTTTAAAATTATCAAAATCTTGTGTGGGGACATGAGAGGGTTCATTCAGGTTGTGTTTGTTGGCTGGAAAAGAGTCTTGGAAACAAAAGTCCAAAGAGActatttcagtttcagtgagGAGAGGTACAGTGTCAAAATACTACAAGATGATCCTTCACAATCACAGTGATTAGTGCTCAATAGGAGGCATGATACCATTTCCTAACCAGCTCATATACTCCCCAAACAATTATTGTGTGAACCTATCGATGCCATTAGCAAGGTCAAAGTTTCACTCCAAACCAGCGCTGTAAACCGATACCCCTCGTTAAAGGCTCTGCTGCCCAGAATGAAGTTCAAACACATTGCATCACATTACAGGAAAGCAGCCTTATGAATTTAGTGGCCGATTATCTCCCAGGTTAGTTAAAGGTTAAGCTGTAATAAACCACAATGAAATGCTAACACACCTCGAGCCCCACACTGTGTCAACACTTTTAGGAACAAGAGGGCTAATTTATAACAAGATCTCTTAAGTagtttcagaaatgtttgtaaAGCTTTTAAGTGCTACTCTATGAGCCACCAGTATTTACTATGGCCACTAAGGTATCAGTTCTTATGTGGGGTGACAGCGGTCCATCTCATGGCTTGTAATAGTAGTGTCTTTCATGGGTGAAAAAGTCTTGATCACTTTCCCTACTAACTACTGCAAAGATGTTAGCTTCACAAAAGGATTCTCAAAAGCTTTCCAGCCTAGAGACTAACAGGCCACGCATAACTGCATTGAAGCATTTGTGTTGCAATAACTCCAAGTGCCACGGTACTTCCCAGCTCATGTCGGCAACCCATTCAGCTTTGAGCTCCTGTCTTTCCACAGGCTAAGTGCGCTTGGATGCTCTGAAAGATCACATGTCCgcagaaacagaaaatgaataaaatgaaagaggACACAAGAGCGTGCATGAGACTGGCATGAGAGAGGAGAAGGGGAAAACGCACTGTATTTCAACTAACTGTGAATCAGGTGGACCACATAACACCAGTGTTCTGTATCAATGAATCTGTTAAAACACTGTGGAGTAATAACAGCCGAGAGTGCCAGCGAATCCAGGGACTGCgagaattttatatttttggtgGTTTTCCCCAATCGCCTGGTGATTGCTTTCCTACAAATTAACAAAGATGGTGCCAGAAAACTGCATACACAATCCCCAAGGCCATGGCTGCATTTGAGAAATGGGAGTTATGGATCTAGTGTCTGGAAAACACCACGTGGTCGATGACTGAATACCAAGGCATTCATCTGGATTGACCTGTACTTTCCTAGCAGTTTTTCAGATAATTTTCCAAATAACACCCTTAAAACAACACCAAGACAGCAGGGATGGTCTGAAACAGCAAGCTGGGAGAAAAGTTCCTCCGCAAGTAACAAGAGAAGACATTTCTGACCATGTGGGCTGCAAAACAGCTTcgtacatttttttgtttggaaattTACTCTACCAGCTAAGTAAAAGCATTTGTCTTGAGTTTTCAAGGTTACACTGCCATAAGACAGTCTCGTCATGATTTATTGCAACTTGAAAAAACACGTTTATCCATGTTGTAATTGccctctctttttttgttttggttttaagtgATTTGCCTAAAACAACTTAAATGGCTATGGTTTAGTTAACACTGACATTAGCACACACTCATTATAAGGAGTCTCATTATGAACCACACCCTTCAATTGATATTCCACCCCATTTCAAACTCTGAGCTTGGATTGGGATTGATTTTCATCTGTTAAAAATAAGatttacacacagaaaaagtaTGTTCTGTTGCCATTGGTGTTCTTACCCAACTTCAAAGTCAAAGTGCTGAGAATCCAGCCGATTTAATTCAAGCAGCCTATAACCCAATTACACACACCTCCTACCTGATTGTGAAGGTCCAGTTTGGAGAGACAATTAAAACGATGCCCACCACCTCCCACCCCACATGTACACAGcgacacacactgacaacatAGTAATATCAAGGAGGGCTGGGCCAGTGCTTTGAGGAATATTAAGGCTCTGtgctttttcataaaaaaaaaaaaatacaaaaaaaatacaaaaaattaaaattaaaaattaaatcttcATCGGTCACTGGCAGCTCACCGCTCTCTGAACACAGAGAGGTTTCTTCAACGAAAGAACTGCCACATAACAGATGCAACcgttttcaaatataaatataaaatgtacttaaaacaGACTGTAGATGTgggaagggggaggggaggcacAAGGAACGTGAGTTTTCACTTCGTTTCAGGTGTAAAAAGTGGGCTGCTGTGGGGGGGTTGTGAATTCAATCCAAGGCGGAAGTGACCCATTTGATCAGCGAATTCTGTAATCCGGCAGCATTAGTCTCCGTTCTGAAATAACCTGACCACCTTTCTTCACGCTTATGCCCAATGAGCCTCTATAGGACGCCCATATGAAACCACTACTCACTGCTGGGCATTTTAAAGCCATTCTCAGGCACGAAACTTGTAAAAATCTGCTTCAGGAAAAGGCTTACTCAGAGCTTATTGCAAGAATTGTAGACAGTGGGTGGGTTATGGTGGAGGAAATGAATAGCGTACTATGCCTTTTTGTCCACTGGCAAACTTAATGGTGCACCACTGAAATGTGTCCCCCTCTCCCAACCTCATTTATTCTTGTTCAGCCAAGGCATCTTGTCCTGAAAAGCTGGAGCAGTTAGCTTAGCATGGGAGGTGGTGttgaagcagcagcagaatgAAGCTTGACACTCATGCTTTAATACTGCTCTTATTTATCAATTCATACCTGGCAACATATGAAATCCTAAGGGATGAACTATGACATCATGGAAAGGTATCTCCCCGTCAGCCAAAcctgtgtatttaaacatttaacacacTTATTGCCAAGAgccattttcctttcttttgttcttctgCGCACAGGTGTCTGTTATGGCAATTCAGAAAGGCACTACAGGGCCATAGTGGTCTTTTCAGCACTAAAAGAATAGACGCATCCAATTAAAAGTAGAATGCAAAATGTCATTGGGGGAAGAAACaaagtcaagtatcaagcagGCCCACTCGTTTAGTGTTCCACACCACTACTGCATTTTTTCCACctgaaaggaaataaagacaTGTTCCCTATTCTTAATCCCTCTTCTCCACACTCAGGGGTAAGGAGGAAGTGCAGATGGATAGGGAGggaggtttgtgtgtgtgtgtgtgagagagggagagagaaagattgAGAAAGAGAAGGTTGATCTCTGAACACCtgataagaaagaaaacattaaaaaattagAAATGTAGACCAGTGCTGGCCATAGAGACGCACTCTTAACTTGCAGTGGGGAAGTCAGACACTGGATTCAGGCAGACTTCCCTGGAGGGAAACTTGTGCCATGTCACAATCTGggccctgtttttttttttttttttttttttgttcagtttgctTTTTGGCAAGACCACCAGCCGTTAAGGCAAGGCACGAGTAACCCGTTCAAAACCTTACCGTCGCCTGTGTCTCCAGCGGCCCTTTGAACACTCCTATAGCTCTAAGGCTAAAGACGATCTCTTGGCTCCCGAAACCACACAATCgatctcccccccccaccccttcatGTCGGGTGAACCACAGTGTCCCGGAGTAGCGCCATCATCCGTGTCACACCTGTGGACAAACTCCACAAAGAAGCACTGCAGAGATGAAGAGGAGAGCGGcagaggagcaggaggaggggaGCATACTGCTGTGCTGATGCGCAGTTTCTCCTCCCAGAAGGGCTGATGCACTACACAGTCCACAGGCTTCTCTTactcacatatatataatatatctctAAGACAGCCTGGCTTCTACACTGGGATTCTACTGTCCTGCAGCACCTGATATTAAGGGCTCCCACTCCTCTGTTAAGCCCTTGCTTTTACCCTTCACCCCCCACAAAAACCCTCTCTGGCTCCCCGCCCCTCTCCCCAGCCTCCTCCTCGATTCCCAgtttacagtttttttgtttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197442 True 7148 lncRNA 0.42 1 18742602 18749749

Neighbor

gene id symbol gene type direction distance location
AMCG00006170 NA coding upstream 1512 18719673 ~ 18741090 (+)
AMCG00006175 fcho1,LOC107751067,LOC101065258,LOC102200842,LOC103367496 coding upstream 106573 18592627 ~ 18636029 (+)
AMCG00006173 LOC106573927,LOC106613609 coding upstream 207880 18518382 ~ 18534722 (+)
AMCG00006176 NA coding upstream 274607 18456714 ~ 18467995 (+)
AMCG00006177 NA coding upstream 287182 18453898 ~ 18455420 (+)
AMCG00006168 NA coding downstream 251025 19000774 ~ 19001556 (+)
AMCG00006167 NA coding downstream 261099 19010848 ~ 19012331 (+)
AMCG00006183 NA coding downstream 456025 19205774 ~ 19228566 (+)
AMCG00006186 NA coding downstream 539650 19289399 ~ 19346208 (+)
AMCG00006185 sin3b,LOC106933771 coding downstream 600166 19349915 ~ 19380787 (+)
G156671 NA non-coding upstream 519454 18158840 ~ 18223148 (+)
G156598 NA non-coding upstream 898626 17842139 ~ 17843976 (+)
G156567 NA non-coding upstream 964732 17774665 ~ 17777870 (+)
G156564 LOC100846954,LOC107575789 non-coding upstream 1033881 17707670 ~ 17708721 (+)
G156521 NA non-coding upstream 1171070 17567559 ~ 17571532 (+)
G156771 NA non-coding downstream 7177 18756926 ~ 18757205 (+)
G156772 NA non-coding downstream 7517 18757266 ~ 18757542 (+)
G156777 NA non-coding downstream 27443 18777192 ~ 18777554 (+)
G156807 NA non-coding downstream 91054 18840803 ~ 18843866 (+)
G156809 NA non-coding downstream 99597 18849346 ~ 18849615 (+)
AMCG00006174 NA other upstream 262515 18478128 ~ 18480087 (+)
AMCG00006138 NA other upstream 386013 18190224 ~ 18356589 (+)
G156640 NA other upstream 761965 17973741 ~ 17980637 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 978374 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 1007518 17662190 ~ 17735084 (+)

Expression


Co-expression Network