G156777


Basic Information

Item Value
gene id G156777
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 18777192 ~ 18777554 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197450
GTGAGATCCAAACTATTCTTGTGTAATTTCAACTATTACCTATTACCTATATTACCTATTATTACCTATTACCTATTACCTGTTTTGGTCCATGATGATATGTGAATTGAGTTTTGGTATTTACAGAGCACTACTTAATACTGGGATCCTTCCCAACCCTCCTCTGTGAAACTCAGACCCACCTCTCTTGGGCTTGGGGAAGCTCTCGTGCAGCCTGAAGACCACTTTCTCCACAAAATGCTGGATGTCACACACCTCAGGCCCCCGCACAAATACCATCCAGTCGTGAGTAAACCCCTCTGATGTGGGCTTCTTTCGTAGCTGTGCCCGATGCCCCAGCTCCAATTTCACCTGCACTGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197450 True 363 lncRNA 0.46 1 18777192 18777554

Neighbor

gene id symbol gene type direction distance location
AMCG00006170 NA coding upstream 36102 18719673 ~ 18741090 (+)
AMCG00006175 fcho1,LOC107751067,LOC101065258,LOC102200842,LOC103367496 coding upstream 141163 18592627 ~ 18636029 (+)
AMCG00006173 LOC106573927,LOC106613609 coding upstream 242470 18518382 ~ 18534722 (+)
AMCG00006176 NA coding upstream 309197 18456714 ~ 18467995 (+)
AMCG00006177 NA coding upstream 321772 18453898 ~ 18455420 (+)
AMCG00006168 NA coding downstream 223220 19000774 ~ 19001556 (+)
AMCG00006167 NA coding downstream 233294 19010848 ~ 19012331 (+)
AMCG00006183 NA coding downstream 428220 19205774 ~ 19228566 (+)
AMCG00006186 NA coding downstream 511845 19289399 ~ 19346208 (+)
AMCG00006185 sin3b,LOC106933771 coding downstream 572361 19349915 ~ 19380787 (+)
G156772 NA non-coding upstream 19650 18757266 ~ 18757542 (+)
G156771 NA non-coding upstream 19987 18756926 ~ 18757205 (+)
G156769 NA non-coding upstream 27443 18742602 ~ 18749749 (+)
G156671 NA non-coding upstream 554044 18158840 ~ 18223148 (+)
G156598 NA non-coding upstream 933216 17842139 ~ 17843976 (+)
G156807 NA non-coding downstream 63249 18840803 ~ 18843866 (+)
G156809 NA non-coding downstream 71792 18849346 ~ 18849615 (+)
G156842 NA non-coding downstream 168269 18945823 ~ 18947076 (+)
G156869 NA non-coding downstream 442250 19219804 ~ 19220278 (+)
G156868 elavl1,LOC105889513 non-coding downstream 460638 19238192 ~ 19241844 (+)
AMCG00006174 NA other upstream 297105 18478128 ~ 18480087 (+)
AMCG00006138 NA other upstream 420603 18190224 ~ 18356589 (+)
G156640 NA other upstream 796555 17973741 ~ 17980637 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 1012964 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 1042108 17662190 ~ 17735084 (+)

Expression


Co-expression Network