G156862


Basic Information

Item Value
gene id G156862
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 19032130 ~ 19032334 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197547
ggATTCCAGGGCCTTCTCTGAATACCTTGAAGGCCCTGACAGTTCGCCACTGGTGAAAAAAGATCTTCAGCATtgtcaattcaaattaatttccctGAGTTTGGAGCTAAGGATAAAGCTGTTGGATTTGGAGCTGTTGGAGATCCCATGGGGTTTATTGAgttaagtaattattattattaagtaagGATTTCTTAGAGATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197547 True 205 lncRNA 0.39 1 19032130 19032334

Neighbor

gene id symbol gene type direction distance location
AMCG00006161 myo1f,LOC108413823,LOC108264988,LOC105011638 coding downstream 144987 18853693 ~ 18887143 (-)
AMCG00006172 NA coding downstream 180051 18833330 ~ 18852079 (-)
AMCG00006171 NA coding downstream 210724 18814417 ~ 18821406 (-)
AMCG00006160 mllt1,LOC108432507 coding downstream 251737 18774925 ~ 18780393 (-)
AMCG00006158 mllt1,LOC106584372 coding downstream 269482 18749834 ~ 18762648 (-)
AMCG00006166 gipc3,LOC106574151 coding upstream 48705 19081039 ~ 19116587 (-)
AMCG00006184 LOC108437281,LOC105889513 coding upstream 207031 19239365 ~ 19269061 (-)
AMCG00006199 NA coding upstream 270326 19302660 ~ 19306140 (-)
AMCG00006195 LOC102214220 coding upstream 792491 19824825 ~ 19859369 (-)
AMCG00006196 ptprd,LOC107559826,LOC107717167,LOC107744639 coding upstream 839558 19871892 ~ 19874931 (-)
G156847 NA non-coding downstream 75815 18956103 ~ 18956315 (-)
G156846 NA non-coding downstream 76095 18955723 ~ 18956035 (-)
G156812 NA non-coding downstream 188214 18840801 ~ 18843916 (-)
G156791 NA non-coding downstream 289921 18741351 ~ 18742209 (-)
G156717 NA non-coding downstream 493887 18533183 ~ 18538243 (-)
G156929 NA non-coding upstream 357743 19390077 ~ 19390399 (-)
G156932 NA non-coding upstream 367100 19399434 ~ 19399637 (-)
G156935 NA non-coding upstream 369848 19402182 ~ 19413340 (-)
G156946 LOC107742786 non-coding upstream 447134 19479468 ~ 19480437 (-)
G156947 uhrf1,LOC107561590,LOC107742786,LOC107549364 non-coding upstream 453216 19485550 ~ 19489841 (-)
AMCG00006127 NA other downstream 2068480 16947997 ~ 16963650 (-)
G156341 NA other downstream 2351358 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 2510441 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 2569965 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 3075040 15954076 ~ 15957090 (-)
G156907 NA other upstream 242866 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 416597 19448931 ~ 19463205 (-)
G157059 NA other upstream 1677465 20709799 ~ 20712216 (-)

Expression


Co-expression Network