G156935


Basic Information

Item Value
gene id G156935
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 19402182 ~ 19413340 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197640
AACaagtggttatttcagtcaaagttgctcttctatcagcttgaatcagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattttttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagtagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtggtagccaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197640 True 426 lncRNA 0.43 2 19402182 19413340

Neighbor

gene id symbol gene type direction distance location
AMCG00006199 NA coding downstream 96042 19302660 ~ 19306140 (-)
AMCG00006184 LOC108437281,LOC105889513 coding downstream 133121 19239365 ~ 19269061 (-)
AMCG00006166 gipc3,LOC106574151 coding downstream 285595 19081039 ~ 19116587 (-)
AMCG00006161 myo1f,LOC108413823,LOC108264988,LOC105011638 coding downstream 515039 18853693 ~ 18887143 (-)
AMCG00006172 NA coding downstream 550103 18833330 ~ 18852079 (-)
AMCG00006195 LOC102214220 coding upstream 411485 19824825 ~ 19859369 (-)
AMCG00006196 ptprd,LOC107559826,LOC107717167,LOC107744639 coding upstream 458552 19871892 ~ 19874931 (-)
AMCG00006197 NA coding upstream 466710 19880050 ~ 19881917 (-)
AMCG00006194 LOC106613507,LOC106574153 coding upstream 482085 19895425 ~ 19922471 (-)
AMCG00006193 LOC107744650,LOC103355422 coding upstream 571339 19984679 ~ 19988411 (-)
G156932 NA non-coding downstream 2545 19399434 ~ 19399637 (-)
G156929 NA non-coding downstream 11783 19390077 ~ 19390399 (-)
G156862 NA non-coding downstream 369848 19032130 ~ 19032334 (-)
G156847 NA non-coding downstream 445867 18956103 ~ 18956315 (-)
G156846 NA non-coding downstream 446147 18955723 ~ 18956035 (-)
G156946 LOC107742786 non-coding upstream 66128 19479468 ~ 19480437 (-)
G156947 uhrf1,LOC107561590,LOC107742786,LOC107549364 non-coding upstream 72210 19485550 ~ 19489841 (-)
G156971 NA non-coding upstream 303833 19717173 ~ 19717679 (-)
G156979 NA non-coding upstream 391608 19804948 ~ 19805171 (-)
G157011 NA non-coding upstream 815246 20228586 ~ 20229103 (-)
G156907 NA other downstream 108362 19275200 ~ 19293820 (-)
AMCG00006127 NA other downstream 2438532 16947997 ~ 16963650 (-)
G156341 NA other downstream 2721410 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 2880493 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 2940017 16454284 ~ 16462165 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 35591 19448931 ~ 19463205 (-)
G157059 NA other upstream 1296459 20709799 ~ 20712216 (-)

Expression


Co-expression Network