G156971


Basic Information

Item Value
gene id G156971
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 19717173 ~ 19717679 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197685
cagaaaagaaaatgccatcGAGTTGCTTGAGAAGTCAAACAAAAGCGCATGAACTGCAGCTTCTCTTGAACAGCAGTGACAGAATCATCTGGTTCTTGGGAAATAATCCGCTATTAGTGTTCGTAATCTTTTGTACATTCTCTGGCCAAAAGATAACAGATGCCCAGCATCCTAATTCATCATCAATTTCACCACTGAACCTCTTCCATTGGGACGGTTTGCTTACATAGCGTTCTTGATGTCTGAGGGGGTGTTTAGGGAATTGAAAACAATCCTGGTCTTGGAGAGCTACAACAGCTCTTTATTTCAGTCattcatttacttaatttaaggCATTATTGGATGAATTAGTTAAGATGATCAAGATCTTTAGCAGCTCATCTATAAAAGCGGACGGGCTATCCAGGACCAGGGTGGGAGATCACAGTTCTTCAATGTAAGCGACATTAATAGATTTATTTCACAATCGAGGGAAATGCTTTCAATATTGGggggcatacattattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197685 True 507 lncRNA 0.40 1 19717173 19717679

Neighbor

gene id symbol gene type direction distance location
AMCG00006199 NA coding downstream 411033 19302660 ~ 19306140 (-)
AMCG00006184 LOC108437281,LOC105889513 coding downstream 448112 19239365 ~ 19269061 (-)
AMCG00006166 gipc3,LOC106574151 coding downstream 600586 19081039 ~ 19116587 (-)
AMCG00006161 myo1f,LOC108413823,LOC108264988,LOC105011638 coding downstream 830030 18853693 ~ 18887143 (-)
AMCG00006172 NA coding downstream 865094 18833330 ~ 18852079 (-)
AMCG00006195 LOC102214220 coding upstream 107146 19824825 ~ 19859369 (-)
AMCG00006196 ptprd,LOC107559826,LOC107717167,LOC107744639 coding upstream 154213 19871892 ~ 19874931 (-)
AMCG00006197 NA coding upstream 162371 19880050 ~ 19881917 (-)
AMCG00006194 LOC106613507,LOC106574153 coding upstream 177746 19895425 ~ 19922471 (-)
AMCG00006193 LOC107744650,LOC103355422 coding upstream 267000 19984679 ~ 19988411 (-)
G156947 uhrf1,LOC107561590,LOC107742786,LOC107549364 non-coding downstream 227332 19485550 ~ 19489841 (-)
G156946 LOC107742786 non-coding downstream 236736 19479468 ~ 19480437 (-)
G156935 NA non-coding downstream 303833 19402182 ~ 19413340 (-)
G156932 NA non-coding downstream 317536 19399434 ~ 19399637 (-)
G156929 NA non-coding downstream 326774 19390077 ~ 19390399 (-)
G156979 NA non-coding upstream 87269 19804948 ~ 19805171 (-)
G157011 NA non-coding upstream 510907 20228586 ~ 20229103 (-)
G157020 NA non-coding upstream 636784 20354463 ~ 20354668 (-)
G157030 NA non-coding upstream 648910 20366589 ~ 20366830 (-)
G157038 NA non-coding upstream 701295 20418974 ~ 20419284 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other downstream 253968 19448931 ~ 19463205 (-)
G156907 NA other downstream 423353 19275200 ~ 19293820 (-)
AMCG00006127 NA other downstream 2753523 16947997 ~ 16963650 (-)
G156341 NA other downstream 3036401 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 3195484 16505364 ~ 16521689 (-)
G157059 NA other upstream 992120 20709799 ~ 20712216 (-)

Expression


Co-expression Network